Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1469 ATGATGCCAGGGAACAATTATAACAGCAGTCATATTCCTACTACACCCACATCAAGATTAGAAAGGCTTCTGAGGGAAAGAGAGCTAAGGAAATCCAACAGGAATTTTCAACCAGTTGAGGAGACAAAAGACAGCAACAAGGAGCTTGAACTCCAAAGTGATTTGTGTTCAAGCAGCGAGAATGACATTCGTGAGGAAGATTTATTTGAAAAGCAGGACGATGCAAGATTGGCAGAAAGATTTCAGAGGCAAGATGAACAGTCAACCAAACAACGCTTACTGGTTGTGGCCAACAGGTTGCCTGTGTCTGCTACTAGAAAGGGTGTGGATTCATGGCAACTTGAGATCAGCGCAGGAGGCCTAGTCAGTGCAATTCTAGGTGTGAGGGAGTTTGACACTAGGTGGATTGGGTGGGCTGGTGTGAATGTGCCAGATGAAGTTGGCCAGAAGACATTGACTAAAGCTTTAGCTGAAAAGAGATGCATCCCAGTATTCCTTGATGAGGAAATAGTTCATCAATATTACAACGGTTATTGCAACAATGTCTTATGGCCTCTTTTTCATTACCTTGGACTTCCACAAGAGGACAGACTAGACACGACTCGTAGTTTCCAATCTCAATTTGATGCATATAAGATAGCAAACCAAATGTTTGCTGATGTGGTTTATAAGCATTACGAGGAAGGTGATGTCGTTTGGTGTCATGATTACCACCTAATGTTTCTTCCAAAATGTTTAAAAGAACGTGATGCAAAAATGAAAGTTGGTTGGTTTCTCCACACGCCATTTCCTTCCTCAGAAATACACAGGACACTACCATCCAGAACTGAACTATTGAGATCTGTACTTGGTGCTGACTTGGTGGGGTTTCATACATATGATTATGCGAGGCATTTTGTCAGTGCCTGTACTCGAATTCTTGGACTTGAGGGCACACCTGAAGGAGTAGAAGATCACGGGAGGCTGATTCGTGTAGCTGCATTTCCTATTGGGATCGACTCTGAACGATTTATCCGAGCCCTTGAACTCCCTCAAGTCCAGGATCACATAAAAGAATTGAAAGAAAAATTTGCAGGCCGTAAGGTAATGCTGGGTGTTGATCGTCTTGATATGATAAAAGGAATCCCCCAGAAAATCTTGGCATTTGAGAAGTTCCTTGAGGAGAATCCTGACTGGCGTGATAAAGTAGTCTTGATACAAATTGCTGTTCCTACAAGAACTGATGTTCCTAAATACCAAGAGCTTACAAGCCAGGTGCATGAGATTGTTGCACGCATTAATGGAAGATTTGGAACACTAACTGCTGTTCCAATACATCACCTGGACCGATCACTTGACTTTCATGCATTATGTGCACTGTATGCTGTTACTGATGTAGCACTCGTCACATCTTTAAGGGATGGAATGAACCTTGTTAGCTATGAGTATGTTGCTTGCCAAGCTTCTAAGAAGGGGGTTCTCATTCTAAGTGAGTTTGCAGGGGCAGCACAGTCTCTTGGCGCGGGAGCTGTGTTGGTAAATCCATGGAATATCACAGAGGTTTCTGCCTCTATTGCTTATGCCTTGAACATGCCTGCTGATGAAAGAGAGAAGCGCCATCAGTTCAACTTCAAGCACGTTACTACTCACACCTCTCTGGAGTGGGCTGCAACTTTCGTCAGTGAACTGAATGACACCATTGTTGAAGCTCAGCTTAGGACGAGACAAATTCCACCCCCACTTCCTAATGAAGTTGCAGTTAATCGTTACTCAAAAGCCAATAATCGATTAATCATTCTGGGCTTCAATGCCACTTTAACTGAACCAGTGGATAACCTTGGAAATGGTGGCCAAATAAGAGAACTGGAGCTTAAATTGCACCCAAATGTAAAAGACGCTTTAAAGAAGTTATGTGATGATCCGAAGACAACAATAGTTGTCCTTAGTGGGAGTGATCGAGGTGTCCTTGACAAAAACTTCAGCGAATACAACATGTGGCTGGCAGCAGAAAATGGGATGTTTCTACGTCCTACTACTGGGGAATGGATGACCACTATGTCTGAAATTTTAAACATGGATTGGGTTGATAGTGTGCAGCAAGTTTTTGAGTACTTTACTGAAAGAACTCCTCGATCTCATTTTGATTTGCGTGAGACTTCAATGATATGGAATTACAAGTACGCAGATGTTGAGTTTGGAAGGCTTCAAGCAAGAGATCTCCTTCAGCATCTTTGGACAAGCCCAATATCAAATGCTTCACTTGAAGTTGTCCAAGGCGGTAAATCGGTTGAGATTCGAGCAGCTGGTGTCTCAAAGGGAGCGGCAATTGATCGGATTCTCGGAGAGATAGTTCATCAGAAGGGCATGAAGGCACCCATTGATTATGTTCTCTGTGTTGGACACTTTCTACCAAAGGATGAAGATGTTTATACATTTTTTGAGCCAGAGCTTCCTTTTGGATCATCAACAATAGCAAGAGCTATGTTATCCAGCTCTAACAAGCCATCTCTACCAAAATTCTCAACTAGTAAGAGTGGTTCTAAAGCAGCTCGACTCAAGAAGCAATTGTCGATGTCAACTTTAGAAAAGAAAAAAATGGATGAGATTCCATTGCAGCCAATATATCGTGATAGAGTATCAATGCAAGAAGGTTCTTCTGTGCTGGATCTCAAAGGTGATAATTACTTCTCTGGTAGTGTTGCACGAAAGAGATCAAGCGCACGATATCTTCTTAAAACATCAGATCATGTCGTCGAACTCTTGAAGAAGTTGGCAGACCATGCATCATCATTATCAATTTGA 2781 0.4239 MMPGNNYNSSHIPTTPTSRLERLLRERELRKSNRNFQPVEETKDSNKELELQSDLCSSSENDIREEDLFEKQDDARLAERFQRQDEQSTKQRLLVVANRLPVSATRKGVDSWQLEISAGGLVSAILGVREFDTRWIGWAGVNVPDEVGQKTLTKALAEKRCIPVFLDEEIVHQYYNGYCNNVLWPLFHYLGLPQEDRLDTTRSFQSQFDAYKIANQMFADVVYKHYEEGDVVWCHDYHLMFLPKCLKERDAKMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLGADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDHGRLIRVAAFPIGIDSERFIRALELPQVQDHIKELKEKFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPDWRDKVVLIQIAVPTRTDVPKYQELTSQVHEIVARINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEYVACQASKKGVLILSEFAGAAQSLGAGAVLVNPWNITEVSASIAYALNMPADEREKRHQFNFKHVTTHTSLEWAATFVSELNDTIVEAQLRTRQIPPPLPNEVAVNRYSKANNRLIILGFNATLTEPVDNLGNGGQIRELELKLHPNVKDALKKLCDDPKTTIVVLSGSDRGVLDKNFSEYNMWLAAENGMFLRPTTGEWMTTMSEILNMDWVDSVQQVFEYFTERTPRSHFDLRETSMIWNYKYADVEFGRLQARDLLQHLWTSPISNASLEVVQGGKSVEIRAAGVSKGAAIDRILGEIVHQKGMKAPIDYVLCVGHFLPKDEDVYTFFEPELPFGSSTIARAMLSSSNKPSLPKFSTSKSGSKAARLKKQLSMSTLEKKKMDEIPLQPIYRDRVSMQEGSSVLDLKGDNYFSGSVARKRSSARYLLKTSDHVVELLKKLADHASSLSI 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1469 926 Gene3D Glycogen Phosphorylase B; 83 338 - -
Alju03g1469 926 FunFam Alpha,alpha-trehalose-phosphate synthase 615 686 - -
Alju03g1469 926 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 91 560 - -
Alju03g1469 926 CDD HAD_TPP 590 813 - -
Alju03g1469 926 CDD GT20_TPS 92 557 IPR001830 GO:0003824|GO:0005992
Alju03g1469 926 Gene3D - 681 761 - -
Alju03g1469 926 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 339 541 - -
Alju03g1469 926 Pfam Glycosyltransferase family 20 92 557 IPR001830 GO:0003824|GO:0005992
Alju03g1469 926 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 681 761 - -
Alju03g1469 926 Gene3D - 617 775 IPR023214 -
Alju03g1469 926 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 92 557 IPR012766 GO:0003825|GO:0005992
Alju03g1469 926 MobiDBLite consensus disorder prediction 30 58 - -
Alju03g1469 926 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 84 338 - -
Alju03g1469 926 Pfam Trehalose-phosphatase 618 833 IPR003337 GO:0003824|GO:0005992
Alju03g1469 926 SUPERFAMILY HAD-like 589 777 IPR036412 -
Alju03g1469 926 Gene3D Glycogen Phosphorylase B; 339 541 - -
Alju03g1469 926 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 79 918 IPR001830 GO:0003824|GO:0005992
Alju03g1469 926 MobiDBLite consensus disorder prediction 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1469 Alju-ChrAlju03 43041924 43049411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1469 2 923 Trehalose Biosynthesis Gene Families AT1G78580 72.269 0.0 1368