LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju03g1459	ATGACGGTGACAATAACGGTTTATGTTGCAGATGATGGCTTCTCCGCAGTGAGACTTCCGAACCTGAGTGTCGTCAAGAGCGAATTTATTAAGGTTTGGTGTTTAATGGAGTCGAAAAGCAACCCAGCCAGGTTTACACTGGGGAGGCAGTCATCGATGGCCCCGGAAAGGCATAGCGACGAACCGGAGCTGCATCAAGGGGGTGATGGCCTTGAAGGTATGGATCCGGGATTTAGGCTGATGTGTTTGGCCAATGAAGGCGATCTGGATGGCGTTCGTGAGCTATTAAATTCGGAGATTAGTGCGAATTACAGAGATATTGATAATCGCACGCCTCTTCATGTTGCGGCCTGTCAGGGATTGACTGATGTGGTTGCTCTGTTGCTCGAAAAAGGGGCTGTGGTTGATCCACAAGATCGCTGGGGGAGCACGCCTCTTGCAGATGCTATACATTATAAAAACAACGATGTGGTCAAATTATTGGAGAAGCATGGAGCAAAGCCTCTGATGGCCCCTATGCATGTTAACCATGCACGGGAAGTACCAGAATATGAAATTGATCCTAAGGAGCTTGATTTTACCAACAGTGTGGAGATAACTAAGGGAACTTTCTGTAGTGCATTGTGGCGTGGAACAGAGGTTGCTGTGAAAAAGCTTGGGGATGATGTCATTACTAATGAGGAGAAAGTGAAGGCCTTTAGAGATGAGCTTGCATTGTTTCAGAAGGTTCGGCACCCTAATGTAGTCCAGTTTCTGGGTGCTGTGACTCAGAGCAGTCCAATGATGATTGTGATAGAATATCTTCCCAAGGGGGATCTTCGTGCATTCTTGAAAAGAAAAGGAGCTTTGAGACCAACAACTGCAGTGAGATTTGGTCTTGATATTGCAAGGGGAATGAACTATTTGCATGAAAATAAGCCATCACCAATAATTCATCGTGATCTTGAGCCCTCTAATATATTGCGGGATGATTCGGGCCACCTAAAAGTTGCAGACTTTGGGGTCAGCAAATTGCTGGCAGTTAAAGAAGACAAGCCTCTAACCTGCCAAGAGACTTCTTGCCGCTATGTGGCTCCAGAGGTTTTCAATCAAGAAGAGTATGACACCAAAGTGGATGTTTTCTCATTTGCTTTAATTCTGCAAGAGATGATAGAGGGCTGCCCCCCATTTAGTGCAAAACAAGATGATGAGATCCCTAAGGTATATGCTGCAAAAGAGCGTCCTCCTTTCAGAGCTCCAGCCAAGCGTTATGCCCATAGACTGAGAGAATTGATTGAAGAGTGCTGGAATGAGAATCCAGCTAAGAGGCCAACATTTAGGCAAATAATAACAAGGCTTGAATCCATGTATAGCACAATTTCTCATAAAAAACGATGGAAGGTTAGGCCACTGAAATGCTTCCAGAATCTGGAAGCCATGTTGAAGAGAGATCACTCAAATCTAAGCAGTCCGGGCGGCTCATCTCGTTCTACAGCCAGCAGTTTATGA	1488	0.4543	MTVTITVYVADDGFSAVRLPNLSVVKSEFIKVWCLMESKSNPARFTLGRQSSMAPERHSDEPELHQGGDGLEGMDPGFRLMCLANEGDLDGVRELLNSEISANYRDIDNRTPLHVAACQGLTDVVALLLEKGAVVDPQDRWGSTPLADAIHYKNNDVVKLLEKHGAKPLMAPMHVNHAREVPEYEIDPKELDFTNSVEITKGTFCSALWRGTEVAVKKLGDDVITNEEKVKAFRDELALFQKVRHPNVVQFLGAVTQSSPMMIVIEYLPKGDLRAFLKRKGALRPTTAVRFGLDIARGMNYLHENKPSPIIHRDLEPSNILRDDSGHLKVADFGVSKLLAVKEDKPLTCQETSCRYVAPEVFNQEEYDTKVDVFSFALILQEMIEGCPPFSAKQDDEIPKVYAAKERPPFRAPAKRYAHRLRELIEECWNENPAKRPTFRQIITRLESMYSTISHKKRWKVRPLKCFQNLEAMLKRDHSNLSSPGGSSRSTASSL	495

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju03g1459	495	SUPERFAMILY	Protein kinase-like (PK-like)	198	447	IPR011009	-
	Alju03g1459	495	FunFam	serine/threonine-protein kinase STY46-like	186	269	-	-
	Alju03g1459	495	Gene3D	Transferase(Phosphotransferase) domain 1	269	483	-	-
	Alju03g1459	495	ProSiteProfiles	Ankyrin repeat region circular profile.	108	140	-	-
	Alju03g1459	495	PIRSF	ILK	22	469	-	-
	Alju03g1459	495	Gene3D	Phosphorylase Kinase; domain 1	185	268	-	-
	Alju03g1459	495	ProSiteProfiles	Ankyrin repeat profile.	108	140	IPR002110	GO:0005515
	Alju03g1459	495	CDD	STKc_MAP3K-like	199	446	-	-
	Alju03g1459	495	ProSiteProfiles	Protein kinase domain profile.	158	450	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju03g1459	495	Pfam	Protein tyrosine and serine/threonine kinase	209	446	IPR001245	GO:0004672\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju03g1459	Alju-ChrAlju03	42941774	42950056	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju03g1459	36	467	MAP Kinase Kinase Kinase	AT4G18950	68.046	0.0	613

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-5	Alju03g1459		PK_Tyr_Ser-Thr	2e-54	CL0016

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