Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1459 ATGACGGTGACAATAACGGTTTATGTTGCAGATGATGGCTTCTCCGCAGTGAGACTTCCGAACCTGAGTGTCGTCAAGAGCGAATTTATTAAGGTTTGGTGTTTAATGGAGTCGAAAAGCAACCCAGCCAGGTTTACACTGGGGAGGCAGTCATCGATGGCCCCGGAAAGGCATAGCGACGAACCGGAGCTGCATCAAGGGGGTGATGGCCTTGAAGGTATGGATCCGGGATTTAGGCTGATGTGTTTGGCCAATGAAGGCGATCTGGATGGCGTTCGTGAGCTATTAAATTCGGAGATTAGTGCGAATTACAGAGATATTGATAATCGCACGCCTCTTCATGTTGCGGCCTGTCAGGGATTGACTGATGTGGTTGCTCTGTTGCTCGAAAAAGGGGCTGTGGTTGATCCACAAGATCGCTGGGGGAGCACGCCTCTTGCAGATGCTATACATTATAAAAACAACGATGTGGTCAAATTATTGGAGAAGCATGGAGCAAAGCCTCTGATGGCCCCTATGCATGTTAACCATGCACGGGAAGTACCAGAATATGAAATTGATCCTAAGGAGCTTGATTTTACCAACAGTGTGGAGATAACTAAGGGAACTTTCTGTAGTGCATTGTGGCGTGGAACAGAGGTTGCTGTGAAAAAGCTTGGGGATGATGTCATTACTAATGAGGAGAAAGTGAAGGCCTTTAGAGATGAGCTTGCATTGTTTCAGAAGGTTCGGCACCCTAATGTAGTCCAGTTTCTGGGTGCTGTGACTCAGAGCAGTCCAATGATGATTGTGATAGAATATCTTCCCAAGGGGGATCTTCGTGCATTCTTGAAAAGAAAAGGAGCTTTGAGACCAACAACTGCAGTGAGATTTGGTCTTGATATTGCAAGGGGAATGAACTATTTGCATGAAAATAAGCCATCACCAATAATTCATCGTGATCTTGAGCCCTCTAATATATTGCGGGATGATTCGGGCCACCTAAAAGTTGCAGACTTTGGGGTCAGCAAATTGCTGGCAGTTAAAGAAGACAAGCCTCTAACCTGCCAAGAGACTTCTTGCCGCTATGTGGCTCCAGAGGTTTTCAATCAAGAAGAGTATGACACCAAAGTGGATGTTTTCTCATTTGCTTTAATTCTGCAAGAGATGATAGAGGGCTGCCCCCCATTTAGTGCAAAACAAGATGATGAGATCCCTAAGGTATATGCTGCAAAAGAGCGTCCTCCTTTCAGAGCTCCAGCCAAGCGTTATGCCCATAGACTGAGAGAATTGATTGAAGAGTGCTGGAATGAGAATCCAGCTAAGAGGCCAACATTTAGGCAAATAATAACAAGGCTTGAATCCATGTATAGCACAATTTCTCATAAAAAACGATGGAAGGTTAGGCCACTGAAATGCTTCCAGAATCTGGAAGCCATGTTGAAGAGAGATCACTCAAATCTAAGCAGTCCGGGCGGCTCATCTCGTTCTACAGCCAGCAGTTTATGA 1488 0.4543 MTVTITVYVADDGFSAVRLPNLSVVKSEFIKVWCLMESKSNPARFTLGRQSSMAPERHSDEPELHQGGDGLEGMDPGFRLMCLANEGDLDGVRELLNSEISANYRDIDNRTPLHVAACQGLTDVVALLLEKGAVVDPQDRWGSTPLADAIHYKNNDVVKLLEKHGAKPLMAPMHVNHAREVPEYEIDPKELDFTNSVEITKGTFCSALWRGTEVAVKKLGDDVITNEEKVKAFRDELALFQKVRHPNVVQFLGAVTQSSPMMIVIEYLPKGDLRAFLKRKGALRPTTAVRFGLDIARGMNYLHENKPSPIIHRDLEPSNILRDDSGHLKVADFGVSKLLAVKEDKPLTCQETSCRYVAPEVFNQEEYDTKVDVFSFALILQEMIEGCPPFSAKQDDEIPKVYAAKERPPFRAPAKRYAHRLRELIEECWNENPAKRPTFRQIITRLESMYSTISHKKRWKVRPLKCFQNLEAMLKRDHSNLSSPGGSSRSTASSL 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1459 495 SUPERFAMILY Protein kinase-like (PK-like) 198 447 IPR011009 -
Alju03g1459 495 FunFam serine/threonine-protein kinase STY46-like 186 269 - -
Alju03g1459 495 Gene3D Transferase(Phosphotransferase) domain 1 269 483 - -
Alju03g1459 495 ProSiteProfiles Ankyrin repeat region circular profile. 108 140 - -
Alju03g1459 495 PIRSF ILK 22 469 - -
Alju03g1459 495 Gene3D Phosphorylase Kinase; domain 1 185 268 - -
Alju03g1459 495 ProSiteProfiles Ankyrin repeat profile. 108 140 IPR002110 GO:0005515
Alju03g1459 495 CDD STKc_MAP3K-like 199 446 - -
Alju03g1459 495 ProSiteProfiles Protein kinase domain profile. 158 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1459 495 Pfam Protein tyrosine and serine/threonine kinase 209 446 IPR001245 GO:0004672|GO:0006468
Alju03g1459 495 Pfam Ankyrin repeats (3 copies) 80 168 IPR002110 GO:0005515
Alju03g1459 495 MobiDBLite consensus disorder prediction 54 68 - -
Alju03g1459 495 FunFam Os01g0748600 protein 179 466 - -
Alju03g1459 495 Gene3D - 50 183 IPR036770 -
Alju03g1459 495 SUPERFAMILY Ankyrin repeat 80 170 IPR036770 -
Alju03g1459 495 SMART ANK_2a 141 170 IPR002110 GO:0005515
Alju03g1459 495 SMART ANK_2a 108 137 IPR002110 GO:0005515
Alju03g1459 495 MobiDBLite consensus disorder prediction 50 70 - -
Alju03g1459 495 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 165 449 - -
Alju03g1459 495 FunFam Integrin-linked protein kinase family 57 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1459 Alju-ChrAlju03 42941774 42950056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1459 36 467 MAP Kinase Kinase Kinase AT4G18950 68.046 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Alju03g1459 PK_Tyr_Ser-Thr 2e-54 CL0016