Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1453 ATGTCCTCAAGTTTCCCACCTCATTCCACACATGCAATTAATAATCTCGGCATTTCAAAGAGCTTCCTTGTGGTGGTTCTTGCTGCTTCCCACAGGAATATGCAGACTGTAAGCTTTTTTGAGCTCTTACTTGTGGCATTAACTTGTTTCCAGTTGCTTGGAATTTCTCATGAGTCAAAGCTACCTCAAGATGAAGTTCATGCTCTTCAAGAAATTACAAGAACAATGGGAGCAAACTATTGGAAGTTTAATGAATCCTGCGGAATTGATACAGTTGGAGTAACACGGGAACTCTCTCCTGTATCAGAGAGAAGACTAGGTTGTGACTGCGGATTTGAAAACAACACAGTCTGCCATGTTGTGAAAATGACTCTCAAGCGCCTTAGCCTCCCTGGCATGCTTCCACCTCAACTGGTCACGCTACCCTATCTTCGAGAAATAGATTTTGCTTACAATCTCTTTACTGGTACTATTCCAAAGGAATGGGCTTCGATGAATTTAACTTCAATCTCTCTTCTTGTGAACCGCTTATCAGGGGAAATTCCTAGGCATCTAGGAAATATCACTACCCTCACATACCTGATGCTTGAAGCAAACCAATTTTCTGGTGTCATTCCTACTGAGCTTGGGAGTCTAATCAACTTGCGGGTGTTGGTACTGTCATCCAATCAATTGACTGGGAGCTTACCAGGGACACTTGCTGGGTTGCAGAATTTGACTGACTTTAGGATAAATGACAACAACTTCAATGGGACCATACCTAACTTTATTCAGAACTGGAAGCTTCTCGAAAGACTAGAAATGCATGCAAGTGGACTAAAGGGACCAATCCCATCAAATACATCACTTTTGGAGAACTTGAAGCAGTTGAGAATCAGTGACATTGATAGTCCTAGTCAAGGTTTTCCTTTTCTGGAAAACATGCCAGACATGGAAACTTTAGTTCTGAGGAACTGTAACCTTAATGGGGAGATACCTTCATACATCTGGACAATGACGAATTTGATAACATTGGATTTCAGTTTTAATAAGATAGTTGGGCACATTCCACCAGTTATAAATACTAGACGTCTGAGATATATGTACCTTACAGGAAATATGCTAAGTGGAAATGTGCCAGAAATCTTGAATGGTGGAAGTAGCATTGATCTTTCGTACAACAACTTTACTTGGCAAGGTCCCGAGCAACCTGCTTGTCAGGATAACATGAACTTGTATCTGAATTTGTTCAGAAGCTTTAAAAAGAAGAACAAGTTAGAAGAATATGTCCCTTGCTTAGAGAATTTCAGTTGTCAACAGTATTCAACTTGCTTACACATAAATAGTGGTGGGATGGATGTAAAGGTGACAGAAAATAAGGGAGAAATCCTTTATTTAGGGGATGGAGATGTTGGTGGCGGTACAGCAACATGCCACTATAGCAACAGTGATAATTGGGGGTTCAGTAGTACTGGAGACTTCATGGATGATTTTAACTCCCAGAACATAAGATACACAGTATCTCTGCCATCTTCGAATTTGCCTGAACTATATTCGACGGCTCGTATATCTCCACTTTCACTTACTTATTTCCATAATTGCATGGAAAATGGGAGCTACACTGTAAATCTCCACTTTTCTGAAATAAAGTTCACAAATGATAATACATATACAAGTCTTGGGAGGCGCATATTCAATATCTATGTTCAGGAACAATTAATTCGGAAGGATTTTAATATTGAGAGTGAGACACATGTTGCTCAAAAACCACTGATACTGCCAATATATAATGTCAGTGTCACAAATCATGTCTTGGAGATTCGGTTCCAATGGGCTGGAAAAGGAACAACTAGAATTCCTGATATAGGAGTTTATGGTCCCATTGTGTCAGCATTGTCTATCGTTTCTGATTCCAAACCTTGCCCCAATGGTGGAAAGAATGGGGCAGTTAGTAAGTTCATTGCAATTGGAATCGCTGCTCTATGCATAGTGCTTTTTATGGCAGGGATCATTTGGTGGAAAGGCTGTTTCAGAGGAAAACTCCAAAAGACAGAAGATATTCAGACAGGAACTTTCAGCATCAAACTGATGAAAACGGCCACTAATGACTTCTCTTGTGATAACAAAATTGGGGAAGGCGGTTTTGGTCCCGTATACAAGGGTCAGTTACCTGATGGTACTGTTGTAGCAGTCAAGCAACTATCATCAATGTCGCGGCAGGGAAATCGTGAATTTCTAAATGAAGTAGGCCTAATATCTTGTTTGCATCATCCTAACCTTGTGAAACTCTATGGATCTTGCGTTGAAGGGGATCAGCTACTACTGGTATATGAGTACATGGAAAATAATAACCTCGCCCGTGCTTTATTTGGCAATGAAAACAATCGGATTCATCTGGATTGGCCCACAAGAGTTAGGATCTGCATTGGCATTGCAAAAGGTCTTGCCTTCCTTCACGAAAAGTCAAGGCTAAAGATTGTGCACAGAGATATCAAGGCTACTAATGTGTTACTTGATGGCAATTTAAATCCTAAAATATCAGATTTTGGTTTGGCCAAACTCAATGAAGGAGAGAAGACGCACATGACGACTCGAGTTGCAGGAACTATAGGATATATGGCTCCGGAATATGCATTGTGGGGCCATCTAACATACAAGGCAGATGTTTACAGTTTTGGTGTCTTAGCCTTGGAAATTGTTACTGGGAAGAGCAATAACAATTATATGCCAGATAATGGCGCTGTTTGTCTTCTAGATTGGGCATGTCAGCTGCAACAAAGTGGAAAGTTAATGGAGCTGGTAGATGAGAGAATAGGGTCAAAAGTTAATGAAAGCGAAGCAGAGAGAGTGCTCAAAGTAGCTCTTCTGTGCACAGATGCATCACCATCAATTAGGCCGACAATGTCCGAGGCTGTAAATATGCTTGAAGGAAAAATGGAGATTCCAAATGTAGTTCCAGAACCAGGTGCTTACAATGAAGATTTGAGGTTTAAAGCCTTGAGAGATCTTGATAAATGGTCGAGGCAGAGTTTGAATGGAAGCCAGGTTCAATCTTCTTCAGCTTCACTCCATACCTTCAGCTTAGAATCTGGCAATACTTTAACTGGTTGTTCTATGGATAATCAGTTCGTCCACAAAACTGAGATTTCACCTTCAAAGGCAAGTTCAACAACACCCTGA 3159 0.4068 MSSSFPPHSTHAINNLGISKSFLVVVLAASHRNMQTVSFFELLLVALTCFQLLGISHESKLPQDEVHALQEITRTMGANYWKFNESCGIDTVGVTRELSPVSERRLGCDCGFENNTVCHVVKMTLKRLSLPGMLPPQLVTLPYLREIDFAYNLFTGTIPKEWASMNLTSISLLVNRLSGEIPRHLGNITTLTYLMLEANQFSGVIPTELGSLINLRVLVLSSNQLTGSLPGTLAGLQNLTDFRINDNNFNGTIPNFIQNWKLLERLEMHASGLKGPIPSNTSLLENLKQLRISDIDSPSQGFPFLENMPDMETLVLRNCNLNGEIPSYIWTMTNLITLDFSFNKIVGHIPPVINTRRLRYMYLTGNMLSGNVPEILNGGSSIDLSYNNFTWQGPEQPACQDNMNLYLNLFRSFKKKNKLEEYVPCLENFSCQQYSTCLHINSGGMDVKVTENKGEILYLGDGDVGGGTATCHYSNSDNWGFSSTGDFMDDFNSQNIRYTVSLPSSNLPELYSTARISPLSLTYFHNCMENGSYTVNLHFSEIKFTNDNTYTSLGRRIFNIYVQEQLIRKDFNIESETHVAQKPLILPIYNVSVTNHVLEIRFQWAGKGTTRIPDIGVYGPIVSALSIVSDSKPCPNGGKNGAVSKFIAIGIAALCIVLFMAGIIWWKGCFRGKLQKTEDIQTGTFSIKLMKTATNDFSCDNKIGEGGFGPVYKGQLPDGTVVAVKQLSSMSRQGNREFLNEVGLISCLHHPNLVKLYGSCVEGDQLLLVYEYMENNNLARALFGNENNRIHLDWPTRVRICIGIAKGLAFLHEKSRLKIVHRDIKATNVLLDGNLNPKISDFGLAKLNEGEKTHMTTRVAGTIGYMAPEYALWGHLTYKADVYSFGVLALEIVTGKSNNNYMPDNGAVCLLDWACQLQQSGKLMELVDERIGSKVNESEAERVLKVALLCTDASPSIRPTMSEAVNMLEGKMEIPNVVPEPGAYNEDLRFKALRDLDKWSRQSLNGSQVQSSSASLHTFSLESGNTLTGCSMDNQFVHKTEISPSKASSTTP 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1453 1052 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 435 630 - -
Alju03g1453 1052 Gene3D - 433 632 - -
Alju03g1453 1052 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 298 418 - -
Alju03g1453 1052 Pfam Malectin domain 437 625 IPR021720 -
Alju03g1453 1052 Gene3D Phosphorylase Kinase; domain 1 670 772 - -
Alju03g1453 1052 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 230 296 - -
Alju03g1453 1052 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 45 1006 - -
Alju03g1453 1052 Gene3D Ribonuclease Inhibitor 299 418 IPR032675 -
Alju03g1453 1052 Gene3D Ribonuclease Inhibitor 68 229 IPR032675 -
Alju03g1453 1052 Gene3D Ribonuclease Inhibitor 230 298 IPR032675 -
Alju03g1453 1052 FunFam Putative LRR receptor-like serine/threonine-protein kinase 773 980 - -
Alju03g1453 1052 ProSiteProfiles Protein kinase domain profile. 697 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1453 1052 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 67 229 - -
Alju03g1453 1052 SUPERFAMILY L domain-like 116 390 - -
Alju03g1453 1052 Pfam Protein tyrosine and serine/threonine kinase 699 968 IPR001245 GO:0004672|GO:0006468
Alju03g1453 1052 Gene3D Transferase(Phosphotransferase) domain 1 773 977 - -
Alju03g1453 1052 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 670 772 - -
Alju03g1453 1052 CDD STKc_IRAK 703 970 - -
Alju03g1453 1052 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672|GO:0006468
Alju03g1453 1052 SMART serkin_6 697 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1453 1052 SUPERFAMILY Protein kinase-like (PK-like) 680 969 IPR011009 -
Alju03g1453 1052 Pfam Leucine rich repeat 190 249 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1453 Alju-ChrAlju03 42869076 42879675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1453 37 863 Receptor kinase-like Gene Family AT1G29750 58.393 0.0 988
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju03g1453 PK_Tyr_Ser-Thr 2.3e-49 CL0016