Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1448 ATGACGTCTTCTACCTCATCCATTGGCTCAGAGGATACGAAGCCATTTTCTGTGCTCTTGGTTTGCCTCGGCAACATCTATAGGAGTCGAGCTGCTGAAGGGGTCTTCAGACACTTGGTCAACAAAAGGGCTCTAGATTCCATGTTCAAAATTGATTCTGCTGGCACCATTAATTACCATGAGCGACATGTGGCAGCTATTATGAAAAGTGAGGATTCTCATAATAATATTCACTCATCCAATTTGGTCGAACGTTCACTGTTGTTGAGTGGAATGAAGCAGACCGCTAAATGA 294 0.4354 MTSSTSSIGSEDTKPFSVLLVCLGNIYRSRAAEGVFRHLVNKRALDSMFKIDSAGTINYHERHVAAIMKSEDSHNNIHSSNLVERSLLLSGMKQTAK 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1448 97 Pfam Low molecular weight phosphotyrosine protein phosphatase 18 75 IPR023485 -
Alju03g1448 97 Gene3D - 1 90 - -
Alju03g1448 97 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 4 65 - -
Alju03g1448 97 SUPERFAMILY Phosphotyrosine protein phosphatases I 14 82 IPR036196 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1448 Alju-ChrAlju03 42844442 42844836 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1448 3 65 Protein tyrosine phosphatase (PTP) family AT3G44620 63.492 8.19e-23 87.0