Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1416 ATGTGGCTGACTTGTAATGATGCAAACACGTCCCTTGTGAATTGTAATGCTATCTGTTTTTCATTAATGCTTTATCTTCATTTTCTCTTCTATTTATGCCATTGCCAAGTGCCAACTATTTTCTGGCGGCACAAGGAAATTCCAAAAGGGGTTGGTTGCTTTTTGACGCAAAGCAACCTTAAGCTCAGCAGTGAAGATCCCAGTAAAAAAGTTTCGGGCTTTTTCGGGCCTCTGCTTGATTTGATTTCTTGTTTCATGGAAGATGTGAAAAGGGTTGTTTGTTTCGTCTTCTTTCTCTGGAATTGGTTGGCTGCTGCTGCTAACACTGACAGTCTTCTTTCTCCAAAGGGTGTGAACTATGAAGTTGCTGCTTTGATTTCAATGAAGAATAAAATGAAAGACGAGCTGCGAGTTATGGATGGTTGGGATATTAATTCGGTTGATCCTTGTACTTGGAACATGGTCGGTTGCTCTGCTGAGGGCTATGTTATTTCCCTGGACATGGCCAGTATGGGTTTATCTGGAACGCTTTCTCCAGGAATTGGAAATTTGAGCCACCTCCGAACACTGTTGTTGCAGAACAATCAGTTATCTGGACCCGTTCCAGCTGAGATAGGAAAGCTTTTGGAGCTTCAGACTCTTGACCTTTCTGGCAACCAGTTCGATGGTGAAATCCCTAGTTCTCTGGGCTTTTTGACTCGTCTTAGCTACTTGCGGTTCAGTAGAAATAAACTATCTGGGCAGATTCCTCAGCTCGTTGCGAATCTCACAGGCCTTTCATTCTTGGACTTGTCATTCAATAATCTCAGTGGTCCCATTCCAAAAATTTTAGCAAAAGGATACAGTATTTCAGGAAACAACTTCCTCTGTGCATCTTCATCAGCACAAATTTGTATGGGTGTTTCAAATCCAATAAATGAAACTGGTTCGTCACTGGAAGTCGGTAGTCATCACCATCGGGTACTTTCTGTTGCCATTGGCATTAGCTGTACATTTCTAATATCAGTAGTGCTGCTTATCTGCTGTGTGCATTGGTACAGATCGCGCATCCTGTATACATCTTATGTGAGGGAAGATTATGACTTTGACATTGGCCATTTGAGGAGGTTTTCCTTCCGTGAATTGCAATCTGCTACTAGCAATTTCAGTCCAAAAAATATCCTAGGACAAGGTGGATTTGGTGTTGTCTACAAAGGAAGTCTTCCAAATAAAATGACAGTGGCAGTGAAGAGGCTTAAAGATCCCAATTACACTGGAGAAGTACAATTTCAAACTGAAGTTGAGATGATTGGCTTGGCAGTGCATCGGAATCTCCTACGTCTCTATGGATTTTGTATGACATCTGATGAGAGGCTACTTGTGTACCCATACATGCCTAATGGCAGTGTTGCTGATCGCTTGAGAGACACTTGCCGTGAAAAGCCATCATTGGACTGGAATAGGCGAATGCGTATTGCTCACGGGGCAGCTCGTGGGCTTCTCTATTTACATGAGCAGTGTAATCCAAAAATTATCCACAGGGACGTTAAGGCAGCAAACATTTTGCTGGATGAAAGTTTTGAAGCTGTGGTGGGTGATTTTGGTCTTGCTAAGCTCTTGGATCAAAGAGATTCGCATGTCACTACTGCAGTTCGGGGCACAGTAGGACACATTGCCCCCGAATATCTCTCCACCGGCCAGTCTTCTGAAAAAACTGATGTTTTCGGATTTGGCATATTACTTTTGGAGCTCATTACAGGGCAGAAGGCTTTGGATGCTGGAAATGGTCAAATCCAGAAGGGAATGATTCTTGATTGGGTCAAAACCTTATTTGAGGAGAAGCGACTGGAAGTGCTAGTTGATAGGGATCTAAAAGGACGTTTTGATCCAATAGAGTTGGAACAAGCAGCGAGGTTGTCTTTACAATGTACTCAATCTCATCCCAGCCTCCGGCCAAAGATGTCGGAAGTCTTAAGGATTCTGGAAGGCCTAGTGGGACAGGGGCAGCCGGAGGAGGAGTCACACGGTGGAGGTAACCTTTACGACGAAAGAAACTGCAGTTTCTCCAGAAATTACAGTGATGGGCATGATGAACCTTCATTTATTATTGAAGCCATCGAGCTTTCCGGACCCCGGTGA 2118 0.4372 MWLTCNDANTSLVNCNAICFSLMLYLHFLFYLCHCQVPTIFWRHKEIPKGVGCFLTQSNLKLSSEDPSKKVSGFFGPLLDLISCFMEDVKRVVCFVFFLWNWLAAAANTDSLLSPKGVNYEVAALISMKNKMKDELRVMDGWDINSVDPCTWNMVGCSAEGYVISLDMASMGLSGTLSPGIGNLSHLRTLLLQNNQLSGPVPAEIGKLLELQTLDLSGNQFDGEIPSSLGFLTRLSYLRFSRNKLSGQIPQLVANLTGLSFLDLSFNNLSGPIPKILAKGYSISGNNFLCASSSAQICMGVSNPINETGSSLEVGSHHHRVLSVAIGISCTFLISVVLLICCVHWYRSRILYTSYVREDYDFDIGHLRRFSFRELQSATSNFSPKNILGQGGFGVVYKGSLPNKMTVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTSDERLLVYPYMPNGSVADRLRDTCREKPSLDWNRRMRIAHGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDAGNGQIQKGMILDWVKTLFEEKRLEVLVDRDLKGRFDPIELEQAARLSLQCTQSHPSLRPKMSEVLRILEGLVGQGQPEEESHGGGNLYDERNCSFSRNYSDGHDEPSFIIEAIELSGPR 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1416 705 FunFam Somatic embryogenesis receptor-like kinase 1 458 668 - -
Alju03g1416 705 Gene3D Transferase(Phosphotransferase) domain 1 458 662 - -
Alju03g1416 705 ProSiteProfiles Protein kinase domain profile. 382 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1416 705 Pfam Leucine rich repeat N-terminal domain 119 158 IPR013210 -
Alju03g1416 705 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 94 654 - -
Alju03g1416 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672|GO:0006468
Alju03g1416 705 Gene3D Phosphorylase Kinase; domain 1 352 457 - -
Alju03g1416 705 FunFam Somatic embryogenesis receptor kinase 1 352 457 - -
Alju03g1416 705 SUPERFAMILY L domain-like 120 288 - -
Alju03g1416 705 Pfam Protein kinase domain 385 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1416 705 Gene3D Ribonuclease Inhibitor 118 300 IPR032675 -
Alju03g1416 705 ProSitePatterns Protein kinases ATP-binding region signature. 388 410 IPR017441 GO:0005524
Alju03g1416 705 FunFam Putative LRR receptor-like serine/threonine-protein kinase 118 300 - -
Alju03g1416 705 SUPERFAMILY Protein kinase-like (PK-like) 366 655 IPR011009 -
Alju03g1416 705 SMART serkin_6 382 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1416 Alju-ChrAlju03 42613015 42617822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1416 126 705 Receptor kinase-like Gene Family AT5G45780 72.461 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Alju03g1416 Pkinase 4.2e-44 CL0016