Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1406 ATGGCCGACGCCGCTTCCAAGAAACCCTCCGCCAGCGTCGCCAACAAGAAGGTCGGCGGTAATACCCTCTTGTTGGGTCGATTCGAGGTCGGCAAGCTTCTCGGCCATGGCACCTTCGCCAAGGTCTACCATGCCCGCAATGTAAAATCCGGTGAAGGTGTCGCCATCAAGGTCATTGACAAGGAGAAAATCCTCAAGAGCGGCCTCGTCGCTCACATCAAGCGCGAGATCTCAATCCTCCGGCGAGTCCGACACCCTAACATCGTTCAGCTCTTCGAGGTCATGGCCACCAAGGCCAAAATCTATTTCGTGATGGAATATGTTCGTGGGGGTGAGCTATTCAATAAAGTCGCTAAAGGTCGATTGAAAGAGGAAAGTGCCAGGAAGTACTTTCAGCAATTGATATCCGCCGTCAGTTTCTGCCACGCGAGAGGTGTATTTCACAGGGATCTCAAGCCTGAAAACTTATTGCTCGACGAAAATGGGGATCTCAAGGTGTCTGATTTTGGATTGAGTGCTGTATCTGATCAAATTCGCCAAGATGGGTTATTTCATACATTTTGTGGGACTCCATCTTATGTTGCCCCTGAGGTATTGGCTAGAAAAGGTTATGATGGGGCAAAAGTTGATGTTTGGGCTTGTGGGGTTGTTCTGTTTGTTTTGATGGCTGGTTACTTGCCCTTCCATGACCAGAATATCATGGCAATGTACAAGAAGATTTACAGGGGTGAGTTTAGATGTCCCAAGTGGTTCACACCCGATCTCACTCGGCTTGTGAATCGTCTTCTTGATACAAACCCGCAAACCCGAATTTCCATCCCGGAGATCATGGAGAATCGGTGGTTCAAAAAAGGGTTCAAACAGATAAAGTTTTATGTGGAGGATGATAAACTCTGTAACATCGATGATAAGATGGACAAGTTTGATGATATAGAATCAATGTCAGACTACTCAGTATCAGAATCTGATTCCGAGGTAGAGACTAGAAGAAGAAACGCTTCACTTCCAAGACCAGCGAGCTTGAATGCATTTGACATAATATCATTTTCTCCTGGTTTTGATCTTTCTGGGTTGTTTGAGGAGAAGGGGGATGAGGCGAGGTTTGTGTCTGGCGCACCAGTGTCAAAGATCATATCAAAATTGGAGGAAATCGCGAGATTGGTCAGCTTCACCGTGAGGAAGAAAGATTGCAGAGTAAGCTTGGAGGGATCAAAAGAAGGCGTAAAGGGGCCATTGACAATTGCTGCTGAGATATTTGAACTAACACCTTCTTTGGTGGTGTTGGAGGTGAAGAAAAAAGCAGGGGATAAAGCAGAATATGATCAATTCTGTAACACTGAATTGAGACCGGGATTGCAGAATTTGATGAGAGAGGAACCTGCTACTTCTTCTTCACAAACACCTAGTACAGATCCTGAACCGCCCCAACAACTACCTATGGATATTGATCCTCCACATTACATGCCTTCAGATACCGAATAA 1482 0.4588 MADAASKKPSASVANKKVGGNTLLLGRFEVGKLLGHGTFAKVYHARNVKSGEGVAIKVIDKEKILKSGLVAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFNKVAKGRLKEESARKYFQQLISAVSFCHARGVFHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPSYVAPEVLARKGYDGAKVDVWACGVVLFVLMAGYLPFHDQNIMAMYKKIYRGEFRCPKWFTPDLTRLVNRLLDTNPQTRISIPEIMENRWFKKGFKQIKFYVEDDKLCNIDDKMDKFDDIESMSDYSVSESDSEVETRRRNASLPRPASLNAFDIISFSPGFDLSGLFEEKGDEARFVSGAPVSKIISKLEEIARLVSFTVRKKDCRVSLEGSKEGVKGPLTIAAEIFELTPSLVVLEVKKKAGDKAEYDQFCNTELRPGLQNLMREEPATSSSQTPSTDPEPPQQLPMDIDPPHYMPSDTE 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1406 493 Pfam NAF domain 338 394 IPR004041 GO:0007165
Alju03g1406 493 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1406 493 CDD STKc_SnRK3 27 281 - -
Alju03g1406 493 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Alju03g1406 493 ProSiteProfiles NAF domain profile. 336 360 IPR018451 GO:0007165
Alju03g1406 493 SMART serkin_6 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1406 493 SUPERFAMILY Protein kinase-like (PK-like) 24 283 IPR011009 -
Alju03g1406 493 FunFam Non-specific serine/threonine protein kinase 18 332 - -
Alju03g1406 493 FunFam Non-specific serine/threonine protein kinase 338 456 - -
Alju03g1406 493 MobiDBLite consensus disorder prediction 457 471 - -
Alju03g1406 493 CDD CIPK_C 342 453 - -
Alju03g1406 493 ProSiteProfiles Protein kinase domain profile. 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1406 493 Gene3D Kinase associated domain 1, KA1 337 457 - -
Alju03g1406 493 MobiDBLite consensus disorder prediction 450 493 - -
Alju03g1406 493 FunFam Non-specific serine/threonine protein kinase 20 107 - -
Alju03g1406 493 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 21 452 - -
Alju03g1406 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Alju03g1406 493 Gene3D Transferase(Phosphotransferase) domain 1 21 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1406 Alju-ChrAlju03 42522139 42523620 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1406 1 493 CBL-interacting serine-threonine protein kinases AT4G18700 74.200 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Alju03g1406 Pkinase 5.7e-74 CL0016