Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1403 ATGGGTTCTGGATGGGGCTCATATGTATTTTGGAGCAGAATTTATTGTGTTTTAATCTGTCTGTTGTGGGGTATTCGTGCGTGTTGGTCGCTTAATGATGAAGTAATGGCTTTGTTAAAGTTCCGGGCTAGAATAAATTCCGATCCTTATGGAGCTTTGGCTAACTGGAAAGCAGATGATCTTGATCCTTGTGACTGGGTGGGTGTTCAATGTATTGACAGTACAGTACAAATGCTGAACTTAAGTGGGCTATCTTTGGAAGGTACACTGGCTCCTGAGCTTGGGAAACTAAGCAACTTACGATATCTTGTATTATGTAAAAATAAGTTTTCTGGCCCCGTTCCTCAAGAACTTGGAGACTTAACTAAGCTGGAGTTGTTGGATTTGAGGGACAATAGCTTGACTGGAAGTATTCCAGCAGAAATTGGCAAGATGTTGTTCCTAAAAGACTGGTTCCTTTTTGTCAACAACTTTGAACTCAATGTTCCTCAAGATCTTGGGAGGTTTGAATTACTCTCTAAAACACAATTGGTTGATGATCACACATCTCATGAGTTAGCTGAAATTTGTAGCATGAATAGAAAACTTGGACATTGCGTGTGGCAGAGCAATTTCAAACTATGGAGCAATGGACACTCGCTTGTCATTCCAATTAAAGGAGCAATTACAAAATACCTTAATTCCTTGACATTGCCATTGTTCAAGCTTCAAAAACGTCATGGCTATAAAAAGAATTGTTTAGACAATCAGCCTAGTGAGTCAGCAATTGCTCAAATACGCCGTAAATTATTCGATCAGTCCAGTAATCTTGCAGCTTCGCCTTTTAGTGGTGGGCCTACAAAACAGATCATTAGTCTCCCAACTACATTGAGTAGTGGAGCCTTTCCAGCTATATCAAACACCAGTCAAAATTTGTCACCTGTGCCATTGCCTTCACCTGCTTCTTCTGGAAATGAATCAAGTCAACAACCTTCAGTAAAAGATAAGGCTTCTGGAGATGCTTGGAAGTACATAATTATTATATTAGGTGTGCTTGTGCTGGTCATTGTTGCTGTTGCCATATTTTGCCTGTGGAATAAGAGAGCAGTAAAAGCAGTTAGGCCATGGAAGACAGGATTAAGTGGACAGTTACAGAAAGCTTTTGTGACAGGTGTCCCTAAGCTAAATCGAGAAGAATTGGAGGTAGCTTGTGAGGGTTTCAGTAATATCGTTATAAACTTTCCTCGAGCCATCGTATATAAGGGAACTCTATCTGATGGAACCGAGATTGCCGTTTCATCGACTGTGATTGCTTCTGCCCAAGACTGGTCAAAGAATATGGAGATTGACTATCGGAAAAAGATTGATACCATGTCCCGTATAAAACATAAGAACTTCATCAATCTTATTGGCTACTGTGACGAAGAAGAGCCATTTTCCAGGATGATGGTGACTGAGTATGTTCCAAATGGATCCCTATTTGAGTATTTGCATGCTGAGGGGCTTGAACACCTCAATTGGCCTACGAGGATGAGGATTATTATGGGTGTGGCTTATTATCTTCAGCACATACACCATGACCTGAATCCACCAATAGCTCATTGCAAGCTCGATTCACATTCGGTCTTGTTAACAGATTGTTTTGCTGCGAAGGTTGCACAGATCATGTTGACCCTACCAACCGAAGATAAAGAAAATTCAAAGAATTCCGAATTGTCATTTAATGCTGATCTTGAAACTAACGTGTATTGCTTTGGGAAATTGCTATTTGAAATCATTTCCGGAAAATTACCAAACTGCAAAGAACAAGAACATCTTGAGAAATTGGCCGGTGAATTTTCAAATGGTAAGAGAAGCATCAGTTATATGATCGATCCTTCCCTTAACTCCTTCAAAGAGAAAGAAATTGATGTGATTTGTGAGGTGATTCATCAATGCACCCAACCTAATCCAAGTCTGAGACCCACAATGAAGGACATAACCTCCAAATTAAGGGATGTTATTGGTTTTTCACTTGACATGGCAGCCCCAGGACTTTCTCCACTCTGGTGGGCTGAATTGGAGATCTTATCAGAAGAGGCCATATAA 2067 0.4035 MGSGWGSYVFWSRIYCVLICLLWGIRACWSLNDEVMALLKFRARINSDPYGALANWKADDLDPCDWVGVQCIDSTVQMLNLSGLSLEGTLAPELGKLSNLRYLVLCKNKFSGPVPQELGDLTKLELLDLRDNSLTGSIPAEIGKMLFLKDWFLFVNNFELNVPQDLGRFELLSKTQLVDDHTSHELAEICSMNRKLGHCVWQSNFKLWSNGHSLVIPIKGAITKYLNSLTLPLFKLQKRHGYKKNCLDNQPSESAIAQIRRKLFDQSSNLAASPFSGGPTKQIISLPTTLSSGAFPAISNTSQNLSPVPLPSPASSGNESSQQPSVKDKASGDAWKYIIIILGVLVLVIVAVAIFCLWNKRAVKAVRPWKTGLSGQLQKAFVTGVPKLNREELEVACEGFSNIVINFPRAIVYKGTLSDGTEIAVSSTVIASAQDWSKNMEIDYRKKIDTMSRIKHKNFINLIGYCDEEEPFSRMMVTEYVPNGSLFEYLHAEGLEHLNWPTRMRIIMGVAYYLQHIHHDLNPPIAHCKLDSHSVLLTDCFAAKVAQIMLTLPTEDKENSKNSELSFNADLETNVYCFGKLLFEIISGKLPNCKEQEHLEKLAGEFSNGKRSISYMIDPSLNSFKEKEIDVICEVIHQCTQPNPSLRPTMKDITSKLRDVIGFSLDMAAPGLSPLWWAELEILSEEAI 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1403 688 Pfam Protein tyrosine and serine/threonine kinase 412 657 IPR001245 GO:0004672|GO:0006468
Alju03g1403 688 SUPERFAMILY L domain-like 28 179 - -
Alju03g1403 688 ProSiteProfiles Protein kinase domain profile. 390 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1403 688 FunFam Inactive receptor-like serine/threonine-protein kinase 372 480 - -
Alju03g1403 688 SUPERFAMILY Protein kinase-like (PK-like) 410 656 IPR011009 -
Alju03g1403 688 Gene3D Transferase(Phosphotransferase) domain 1 481 664 - -
Alju03g1403 688 PANTHER PROTEIN MALE DISCOVERER 2 17 685 - -
Alju03g1403 688 Gene3D Ribonuclease Inhibitor 32 195 IPR032675 -
Alju03g1403 688 Gene3D Phosphorylase Kinase; domain 1 369 480 - -
Alju03g1403 688 FunFam Nuclear pore complex protein NUP107 31 188 - -
Alju03g1403 688 MobiDBLite consensus disorder prediction 306 327 - -
Alju03g1403 688 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1403 Alju-ChrAlju03 42487230 42492949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1403 37 657 Receptor kinase-like Gene Family AT2G35620 25.266 4.91e-44 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Alju03g1403 PK_Tyr_Ser-Thr 1.7e-18 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g1403 03 42487230 42492949 Alju03g1403 03 42487230 42492949 ECH