Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1401 ATGTCGTCATCAGAGGGATTTCTGATAGAAGACAAGAAGAATAACAGGTGTACTGATCAGGAAGACACTTCATTGGGATCTTCTCATCAGACATGTTCGTCCTTTGACTTGAATGAAGGAGCAAGCATGGAAGAAGAAGAAGACAACAATGGAACAGACTGTGATATGTTCATGGCTGGGGAGGAGAATGAAGATGATGATGAGAAAGAGAAGAATAATGAAGAAGAAGGTGATTCAAATAATAATAATAATAATAATAATAGAAGCACAACGAGGGAAGAAGTGAATGAAAGAAGAAGAACAGTGAGACAGTATGTAAGATCAAAGATGCCTCGCCTTCGATGGACTCCTGAACTTCATCTCTCATTTGTTCAAGCTGTAGAAAGGCTTGGTGGTCAAGAGAGAGCCACACCCAAGTTGGTGCTTCAGCTAATGAATGTGAGAGGGCTCAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAACTTGATGAGGCCGGCCAAGTTGTCGGTGGAAACAGATGGAGGCAACGGGAAGGTGTTAATTATTCTCAGAGATGGATATCGTCGCATAATTATCAGTGTGGGAGGCCTCCTCGTGAATATTTGAAGATGGGAGACGGCGGAATCATCCTCGCAACTAATTGCAACGACGTCGTCGACCCACGTTTCTTTCTGCATACAAAACCTCCCGATTCATCATGGCAGCAAATACAGTGGCACTTGGATCGTCAACCTGATCTGAAACTGCAACAGAAAAAGTGGCCTCCATTAATGGAGACCACGAACGCTCATCAATGGAACTTTAAAAGCTTATCTACCAATTACAATGCCACCTCAAAACCAGATCCAAATCAACACTCCAACTTCAATCATAGTCTCAAGCAGCTAGATTTTCAGCCCCCGTTTCGGATCAAGCTGCGGGAAGAAAAGCAATGGCTGCCTGATTTACAGTTGGGGTTGAGTCTGGGAGGTGGCAAAGACATCCAAGAAATTAGCACTGAGCTTTCACTTTCTTAG 1032 0.436 MSSSEGFLIEDKKNNRCTDQEDTSLGSSHQTCSSFDLNEGASMEEEEDNNGTDCDMFMAGEENEDDDEKEKNNEEEGDSNNNNNNNNRSTTREEVNERRRTVRQYVRSKMPRLRWTPELHLSFVQAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVVGGNRWRQREGVNYSQRWISSHNYQCGRPPREYLKMGDGGIILATNCNDVVDPRFFLHTKPPDSSWQQIQWHLDRQPDLKLQQKKWPPLMETTNAHQWNFKSLSTNYNATSKPDPNQHSNFNHSLKQLDFQPPFRIKLREEKQWLPDLQLGLSLGGGKDIQEISTELSLS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1401 343 MobiDBLite consensus disorder prediction 1 101 - -
Alju03g1401 343 NCBIfam myb-like DNA-binding domain, SHAQKYF class 111 166 IPR006447 GO:0003677
Alju03g1401 343 SUPERFAMILY Homeodomain-like 109 165 IPR009057 -
Alju03g1401 343 Gene3D - 110 167 - -
Alju03g1401 343 MobiDBLite consensus disorder prediction 20 38 - -
Alju03g1401 343 MobiDBLite consensus disorder prediction 40 73 - -
Alju03g1401 343 FunFam Myb family transcription factor 109 167 - -
Alju03g1401 343 Pfam Myb-like DNA-binding domain 113 163 IPR001005 -
Alju03g1401 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 167 IPR017930 -
Alju03g1401 343 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 84 247 IPR046955 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1401 Alju-ChrAlju03 42476236 42479123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1401 102 178 G2-like Transcription Factor Family AT2G42660 70.732 5.39e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju03g1401 Myb_DNA-binding 7e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g1401 03 42476236 42479123 Alju03g1401 03 42476236 42479123 ECH