Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1395 ATGGGGGATTCGCGCGATTCTCTCACGCCGCCTGTGAACCATCCGCGCTCGATGCCCGTCCGCGAAGATTGTTGGAGCGAGGAAGCTACCTCCACCCTCGTCGACGCTTGGGGCCGCCGTTATATACAGGTCAACCGCGGCAACCTCCGTCAGAAGGATTGGCAGGACGTTGCCGACGCTGTCAACGCTCTACATGGTCACACCAAGAAGACGCATAGGACGGATGTTCAGTGCAAGAACCGAATCGATACCATTAAGAAGAAGTATAAGGTTGAGAAGAATAGGGTTTCCTCCCCCAACGGGGCTCCTTCCACCTGGCCCTTCTTCGATCGCTTAGACGTTTTGATTGGGCCTTCTTTGAGTACGAAAAAGGCGTCGCCGTCGCCTCCGGTAGTACCTTCTTTGCCGTATCATAAAACCCCGTCCTCTGCATCCACGGTGCCGATGAAGGCCTGGGCGCTGCCGCAGAAGCGGCCGGCGGAGGCACTATTGGAGGATGGATTCTTCATGAGGAATTATTCAGCCGCGGCAGCTGCAGCAGGGGCTGATGAGGATGAGGATGAGGACGACGAGGACGAGGAAGAAGATGAAGATGAAGAGAGGGGAAGCGAGGTTGAGGAAGAAGAGAGGGAGAAGGAAGGGATGAGGAGCTTGGCAAAAGCAATAGTGAGGTTTGGGGAAGTTTATGAGAGGACGGAGAGAGAAAAATTGAGGCAGATGGTGGAATTGGAGAAACAGAGGATGCAGTTTGATAAAGATCTGGAAGTACAAAGGATGCATATGCTCATGGAGACGCAGGTTCAGTTGGGGAGGATCAAACGCGGGAAGCGATCTGGGTCTAATGGTGAGTTAGAACTTTCTCCTTTTCTTCTCAAGTACTGGGTTGATGGCGTATCATGA 900 0.5322 MGDSRDSLTPPVNHPRSMPVREDCWSEEATSTLVDAWGRRYIQVNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKVEKNRVSSPNGAPSTWPFFDRLDVLIGPSLSTKKASPSPPVVPSLPYHKTPSSASTVPMKAWALPQKRPAEALLEDGFFMRNYSAAAAAAGADEDEDEDDEDEEEDEDEERGSEVEEEEREKEGMRSLAKAIVRFGEVYERTEREKLRQMVELEKQRMQFDKDLEVQRMHMLMETQVQLGRIKRGKRSGSNGELELSPFLLKYWVDGVS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1395 299 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 276 IPR044823 -
Alju03g1395 299 MobiDBLite consensus disorder prediction 121 144 - -
Alju03g1395 299 MobiDBLite consensus disorder prediction 1 22 - -
Alju03g1395 299 MobiDBLite consensus disorder prediction 181 206 - -
Alju03g1395 299 FunFam trihelix transcription factor ASIL2 25 91 - -
Alju03g1395 299 Pfam Myb/SANT-like DNA-binding domain 22 114 IPR044822 -
Alju03g1395 299 Gene3D - 25 91 - -
Alju03g1395 299 MobiDBLite consensus disorder prediction 176 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1395 Alju-ChrAlju03 42410812 42411711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1395 21 280 Trihelix Transcription Factor Family AT3G14180 31.778 3.56e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju03g1395 Myb_DNA-bind_4 1.1e-24 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g1395 03 42410812 42411711 Alju03g1395 03 42410812 42411711 ECH