Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1357 ATGGATTTTGCAGATGGAGAAGATAATTCACTTGGTTTCGGCCTGAAGGTGATGATCGCCGCAGCTTTCACGATATTCGCTGTCGTCTTCATAATCGTTTTCCACTTCTACATCCGACGCCGCCGACGAATTCGTCAGCTGAGACTGAGCAGACGCCTCGCGGATCAACCAGTTTATCAAATCAGCACTCAAGTATTGCCGATTGATGCCGAATTACGTTCTCCGAACGGCGACCGTCAGGGGCTTGACTCTTCCGTCATAGCGTCGATTCCTAAATTCTTGTACAAGCAAACGGACCAGTTCAACGACGGCGAAGCCTTAGAGTGCTCAGTTTGCTTAGCTATTATTGTCGAAGATGCAGCCGTTAGGGTTTTGCCTAACTGCAAGCACGTGTTTCATGTTGATTGTGTTGATACTTGGTTCGCTTCCAACACCACTTGTCCCATTTGCCGTACGGTTGTTGAACCCACTGTGCGGTCCGGCGGTGGCGCTGTTCAACCCACGGCACCGCCGGAATTAGAGAGTGGTGGGATTGTATGA 540 0.5019 MDFADGEDNSLGFGLKVMIAAAFTIFAVVFIIVFHFYIRRRRRIRQLRLSRRLADQPVYQISTQVLPIDAELRSPNGDRQGLDSSVIASIPKFLYKQTDQFNDGEALECSVCLAIIVEDAAVRVLPNCKHVFHVDCVDTWFASNTTCPICRTVVEPTVRSGGGAVQPTAPPELESGGIV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1357 179 PANTHER RING FINGER DOMAIN-CONTAINING 19 154 - -
Alju03g1357 179 CDD RING-H2_EL5-like 108 151 - -
Alju03g1357 179 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Alju03g1357 179 SUPERFAMILY RING/U-box 86 157 - -
Alju03g1357 179 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 157 IPR013083 -
Alju03g1357 179 SMART ring_2 109 150 IPR001841 -
Alju03g1357 179 Pfam Ring finger domain 108 151 IPR001841 -
Alju03g1357 179 FunFam E3 ubiquitin-protein ligase ATL6 71 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1357 Alju-ChrAlju03 42102784 42103323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1357 16 159 C3H Transcription Factor Family AT2G42360 40.268 2.05e-27 101