Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1347 ATGGTTGTTCATAACAATCAAGATTCAGCTTCTGGAGGCATTCTTGAGAACGTGTGGGCCAAAATCACTAACAACAACAATAATGGATCATCACAATGGGAAGAACTGCCTAATCTGGGTGAAAGAGAAGGGTCAATGGAAGTTTTAAGAAGGCTTCCTAGTTTAGGAAGATGGATATCAATGGGAGCTGATTTCTGGGAAGAAATCTTAGATGGGTTTCCAGCTTGTAGTAGTAATGTTGATTCAGAAATTGGCAGAGCTTTTGAGTGCGATAAGAAGAAGGTTGAAGAAGAAGAAGAAACAGTGAGAGTGAAAACAGAGAAAAGGGTATCTGCAAAACATTACAGAGGAGTGAGAAGAAGGCCATGGGGGAAATATGCAGCAGAAATTAGAGACTCGTCAAAGAAAGGAGCTAGGGTTTGGCTGGGGACTTATGACACAGCTGAGGAAGCAGCTTTGGCTTATGATCAGGCTGCTTTGAGAATTAGAGGACCTAAGGCATACCTGAATTTCCCAATTGAGACTGTTTCAAAGGCCTTAGGATTTGACCAGAAGAAAGGAAATTTCTGCAGCTCCAGAAGAAAGAGAAGATGTAGTGAGAGAGATGAAGTTGTTGGTGTCATGATGAATAAAGAACCTCCTGCAAAGAAGAAAATGACAAGCTTGGGAGGGATGATAGGGAATGAAGATGATCATGTTTTTGAGTTTCAGGACTTGGGAATTGATTGTTTGGAAAGTTTGTTATCTTCCTTTTGA 756 0.4087 MVVHNNQDSASGGILENVWAKITNNNNNGSSQWEELPNLGEREGSMEVLRRLPSLGRWISMGADFWEEILDGFPACSSNVDSEIGRAFECDKKKVEEEEETVRVKTEKRVSAKHYRGVRRRPWGKYAAEIRDSSKKGARVWLGTYDTAEEAALAYDQAALRIRGPKAYLNFPIETVSKALGFDQKKGNFCSSRRKRRCSERDEVVGVMMNKEPPAKKKMTSLGGMIGNEDDHVFEFQDLGIDCLESLLSSF 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1347 251 FunFam Ethylene-responsive transcription factor 2 113 174 - -
Alju03g1347 251 Gene3D AP2/ERF domain 113 174 IPR036955 GO:0003700|GO:0006355
Alju03g1347 251 CDD AP2 113 173 IPR001471 GO:0003700|GO:0006355
Alju03g1347 251 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
Alju03g1347 251 PRINTS Ethylene responsive element binding protein signature 138 154 IPR001471 GO:0003700|GO:0006355
Alju03g1347 251 PANTHER DNA-BINDING DOMAIN 96 194 IPR044808 GO:0003700|GO:0009873
Alju03g1347 251 ProSiteProfiles AP2/ERF domain profile. 114 172 IPR001471 GO:0003700|GO:0006355
Alju03g1347 251 Pfam AP2 domain 114 164 IPR001471 GO:0003700|GO:0006355
Alju03g1347 251 SUPERFAMILY DNA-binding domain 114 174 IPR016177 GO:0003677
Alju03g1347 251 SMART rav1_2 114 178 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1347 Alju-ChrAlju03 42035058 42035813 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1347 12 251 AP2-EREBP Transcription Factor Family AT4G18450 35.831 1.73e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju03g1347 AP2 6.7e-17 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g1347 03 42035058 42035813 Alju03g1347 03 42035058 42035813 ECH