Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1344 ATGGCTTCTTCAAACCCTAACAGACACTGGCCAAGCATGTTCAAGTCCAAGCCTGCATCTTGCAACTCCCTCCACCACCAATGGAATAAGAATGACAACATCATGTCACCTCCAAGCTGCCACAGAACCTCTTACGCATCAGGTGATCAGGAGGAGAGAAGTGCAGAGCCAAAGCCAAGATGGAACCCAAAACCAGAGCAGATTCGGATACTGGAAGCCATATTCAACTCTGGGATGGTGAACCCTCCAAGAGACGAGATTAGGAAGATCAGAGCTCAACTCCAAGAGTATGGTCAAGTCGGTGATGCCAATGTCTTCTACTGGTTCCAGAACCGTAAATCCAGATCCAAACACAAGCTTCGTCACCTCCACAACTCTACTTCTAATAATAATTCCTCCCATCAAACCCAAAACCTAAACAACAATTCCTCTCCCAAAGAAATCACACCACCACCACCACCACAACCTAATAAGCCATTAATGTCTAATATTGTCTTCTCCGACGACGTCTCTTCTGATACTGTACCTCCCATTTCTTCGCCGCCGCCGCCGCCAACGCCTCAGCCTTTCTTCTTTATTCCTGTGCAACATAATGTTCCTATTCCTGTTCCTATTACACAAGGTTTTTGCTTCTCTGAACTATCAAGTGTGGTTCAACCTGAAGGTCCTCGTGATCATCAGCAACAAATCAGTACTGTTGGGTCTAGCACCAGTCTTTTGATTAACGAAATCATGTGCCATTCACCTTCCAACAAGAATGACCAAGACAAGTTTATGCAAATGCAACAGCACCCTCCAACCACTCACTCTATTTTCCCTCCCGCTAGGACCACCACTGTTACTGTTCCATCTCCGATAATCTCTCAGATTCAAGGGACGGAAGAGGGTACGATGAAATCGACAGTGTTCATTAACGACGTCGCATTTGAAGTGGGTGTGGGTCCCGTCAACGTGAGGGAGGCCTTCGGCGATGACGCGGTGCTCATCCACGTCTCCTCCGGTCAGCCAGTGCTTGTCGACGAATGGGGCATCACCCTCCAGCCTCTTCAGAACGGCGCATCTTATTACCTGGTGCGCATGTTATCGTGA 1089 0.4803 MASSNPNRHWPSMFKSKPASCNSLHHQWNKNDNIMSPPSCHRTSYASGDQEERSAEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLHNSTSNNNSSHQTQNLNNNSSPKEITPPPPPQPNKPLMSNIVFSDDVSSDTVPPISSPPPPPTPQPFFFIPVQHNVPIPVPITQGFCFSELSSVVQPEGPRDHQQQISTVGSSTSLLINEIMCHSPSNKNDQDKFMQMQQHPPTTHSIFPPARTTTVTVPSPIISQIQGTEEGTMKSTVFINDVAFEVGVGPVNVREAFGDDAVLIHVSSGQPVLVDEWGITLQPLQNGASYYLVRMLS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1344 362 MobiDBLite consensus disorder prediction 160 175 - -
Alju03g1344 362 MobiDBLite consensus disorder prediction 117 189 - -
Alju03g1344 362 SMART HOX_1 56 123 IPR001356 GO:0003677
Alju03g1344 362 Pfam Homeodomain 58 118 IPR001356 GO:0003677
Alju03g1344 362 CDD homeodomain 57 119 IPR001356 GO:0003677
Alju03g1344 362 SUPERFAMILY Homeodomain-like 55 122 IPR009057 -
Alju03g1344 362 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 359 IPR044557 GO:0003700|GO:0050793
Alju03g1344 362 ProSiteProfiles 'Homeobox' domain profile. 54 119 IPR001356 GO:0003677
Alju03g1344 362 MobiDBLite consensus disorder prediction 46 65 - -
Alju03g1344 362 Gene3D - 58 123 - -
Alju03g1344 362 MobiDBLite consensus disorder prediction 1 65 - -
Alju03g1344 362 MobiDBLite consensus disorder prediction 1 45 - -
Alju03g1344 362 MobiDBLite consensus disorder prediction 125 145 - -
Alju03g1344 362 FunFam WUSCHEL-related homeobox 11 58 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1344 Alju-ChrAlju03 41997025 41998566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1344 1 358 Wox Gene Family AT5G45980 40.751 6.08e-66 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Alju03g1344 Homeodomain 1.1e-14 CL0123