Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1342 ATGGAACAAGTATTTAAAGCGTTTCTCCTCCTGCTTCTATACCAATCTCTGCTTGTATCAGCGCAGAGCTCTTATCGGGACCTTAGTTCCCTACAATCTCTCACAGAATCATGGCAGAACAAACCACCAAGCTGGGTGGGTTCAGATCCTTGTGGCAGTGGTTGGGAAGGAATTACATGCACCAATTCAAGAGTGACCTCAATATTATTAGCAAGCATGAATTTGGTGGGTAAGCTGTCTTCAGATATCCAGTTATTATCTGAGTTAGACGCTTTGGATCTCTCTTACAACAAGGGCCTGGCAGGAACAATTCCGCAAGAGATTGGAAATTTGAGAAAATTAAAAACCCTTATATTGGTTGGTTGTAATTTCTCTGGTAGTATTCCAGATTCAATAGGATCTTTGCAGCAGCTGGATTTTCTAGCTCTGAACTCTAATCAGTTCAGTGGAAACATTCCACCTACCATTGGCAATCTAACCAATATTAATTGGCTAGACCTTTCTGATAACCAGCTTGAAGGACCTATCCCAATCTCTGAAGCAGGAGTACTTGGACTTGAAAAGCTGCTTAAGGCAAAGCACTTTCACTTGGGAAACAATAGGCTCTCAGGTGGAATCCCAGCTGAACTTTTTAGTTCAAATATGAGTCTGATCCATGTGCTTTTTGATAACAATCAACTAACTGGCAGTATTCCTAATACCATTGGGCGGGTGAACTCATTGGAGGCAGTCCGTTTCGATGGGAACCAATTAAGTGGGAGTGTGCCTTCAACTATCAGCAATCTCAGAAATCTTAGTGATCTGTATTTATCAAATAATAGGTTGAACGGTTCTCTGCCAGATCTTACGGGAATGAATCTTCTTGCCTATGTGGATCTGAGTAACAATACTTTCGATTCTTCTGTTATTCCTTCATGGGCTTCAAGTTTGCCGCTTATGACAACCTTAATGTTGGAGAACACCAACCTACAAGGGCAGATACCTGTCTCCTTATTTAACCAAGCCAGTTTAGAGTCCGGGGTATTGAAGAGCAACCAGCTCAATGGCACCCTAGATATTGGCAATGCCAACAGCAACCGCTTGCAACTTATTGATTTGGAGAATAATACAATTACTGACTTCACGCAGAAAAACATGAACTATAAAGTTTCAGTAGTACTAGTTCGCAACCTGATTTGCCTTGAAGCAGAAGCTTCTACTAAACGTTACTGCCAAGAACCCACATCCAGTTCCTTATATTCAACGCAGCCAAATAATTGCTCGCCTCTTCCTTGCAGTTCTGGTCAGATTTCCAGTCCTAACTGCAAATGTTCATATCCATACACTGGAACTCTATTTGCCAGAGTTATTAGTTTCTCAGACCTTGGTAATGCAAGTTATTATGAAGAACTTGAGCTATCTCTGATGACTGCTTTTCAATCACAAAATCTCCCGGTGGATTCTGTTTCTCTAAGTAATCCGTTCAGGAACCCATCTACTGATTATCTTCAATTGTCCCTTAAAGTCTTCCCATCTTCAAGTGATCGTTTCAATAGAACTGGAGTTTCAAATATTGCTTTTGTGATTAGCAGCCAGCTTCTTAAGTTCCCAAAATTTTTCCTTCCTTACTTCTTCATTGGTGATGTCTATGGATACGATGCAGATGGATCAAAGAAGTCATCACGTACAGGGCTTATAGTTGGTGTAGTAGTTGCTATTGTGATCGTGCTGGTATTTGTACTCCTTGCAGTAATATATGCTGTACGTCAAAGGAAAAGAGCAAAAAGATCTGCTGAACTGAACCCTTTTGGAAACTGGGAACTGAACAAGAACATCGGCAAGGCTCCTCAGTTAAAAGGAGCACGATGGTTTTCTTTAGAAGATCTTAAAAAATACACCAACAACTTCTCTGAAGACAACACTATTGGATCTGGAGGCTATGGAAAGGTTTACCGAGCTGTTCTGCCCACTGGAGAACTACTTGCCATCAAACGGGCTGCAAAAGAATCCATGCAGGGTGCTGTTGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCATCATAAGAATCTTGTCAGTCTAGCGGGTTTCTGTTTCGATAAAGGTGAACAAATGCTGGTGTATGAGTATATTCCAAACGGCACTTTAATGGATAGTCTTTCAGAAAAGTCTGGGATCAGAATGGATTGGATGAGAAGGCTTAAAGTAGCCCTGGGTGCAGCCAAGGGCTTAGCCTATCTTCATGAGTTTGCCGACCCACCAATCATCCACAGGGATATAAAATCAAGCAACATTCTACTCGATGAGCGCCTTAACGCAAAAGTCGCAGATTTCGGACTCTCCAAACTTCTTGTTGATGCTGAAAGGGGCCATATCACTACTCAAGTCAAAGGAACAATGGGTTACTTGGATCCTGAGTATTACATGACACAACAATTGACTGAAAAAAGTGATGTATATAGCTTCGGAGTAGTGATGCTGGAACTAGTGACAGCAAGAAGGCCAATAGAGAAAGGGGTATATATAGTGAGAGAGGTACAAAATATAATGGATATATCGAAAGAACTATTCAACCTCCATTCCATCATAGATCCATTCATCAACAAAGTGACTCCTCCACATGGTTTGGAGAAGTTTGTGGCCCTGGCAATGAGATGTGTCAGAGAATATGCAGCTGAGAGACCATCAATGGCTGAGGTGGTAAAGGAGATTGAGAATATAATGGACATTGCCGGATTGAACCCTGCTTCTGAATCAGATCCAACCACAGAAGAAATCGATGTGGAGGCACGTGGCGGCAATCTACGTCATCCTTATGACCATAAAGAAGGTTTTAGCTATAGTGGACCCCTTCCTTCAACAAAGGTAGAGCCTCAGTGA 2862 0.4172 MEQVFKAFLLLLLYQSLLVSAQSSYRDLSSLQSLTESWQNKPPSWVGSDPCGSGWEGITCTNSRVTSILLASMNLVGKLSSDIQLLSELDALDLSYNKGLAGTIPQEIGNLRKLKTLILVGCNFSGSIPDSIGSLQQLDFLALNSNQFSGNIPPTIGNLTNINWLDLSDNQLEGPIPISEAGVLGLEKLLKAKHFHLGNNRLSGGIPAELFSSNMSLIHVLFDNNQLTGSIPNTIGRVNSLEAVRFDGNQLSGSVPSTISNLRNLSDLYLSNNRLNGSLPDLTGMNLLAYVDLSNNTFDSSVIPSWASSLPLMTTLMLENTNLQGQIPVSLFNQASLESGVLKSNQLNGTLDIGNANSNRLQLIDLENNTITDFTQKNMNYKVSVVLVRNLICLEAEASTKRYCQEPTSSSLYSTQPNNCSPLPCSSGQISSPNCKCSYPYTGTLFARVISFSDLGNASYYEELELSLMTAFQSQNLPVDSVSLSNPFRNPSTDYLQLSLKVFPSSSDRFNRTGVSNIAFVISSQLLKFPKFFLPYFFIGDVYGYDADGSKKSSRTGLIVGVVVAIVIVLVFVLLAVIYAVRQRKRAKRSAELNPFGNWELNKNIGKAPQLKGARWFSLEDLKKYTNNFSEDNTIGSGGYGKVYRAVLPTGELLAIKRAAKESMQGAVEFKTEIELLSRVHHKNLVSLAGFCFDKGEQMLVYEYIPNGTLMDSLSEKSGIRMDWMRRLKVALGAAKGLAYLHEFADPPIIHRDIKSSNILLDERLNAKVADFGLSKLLVDAERGHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELVTARRPIEKGVYIVREVQNIMDISKELFNLHSIIDPFINKVTPPHGLEKFVALAMRCVREYAAERPSMAEVVKEIENIMDIAGLNPASESDPTTEEIDVEARGGNLRHPYDHKEGFSYSGPLPSTKVEPQ 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1342 953 ProSiteProfiles Protein kinase domain profile. 629 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1342 953 Gene3D Ribonuclease Inhibitor 184 394 IPR032675 -
Alju03g1342 953 SUPERFAMILY L domain-like 31 388 - -
Alju03g1342 953 FunFam Leucine-rich repeat protein kinase family protein 182 281 - -
Alju03g1342 953 PANTHER RECEPTOR-LIKE PROTEIN 55 33 902 - -
Alju03g1342 953 Gene3D Ribonuclease Inhibitor 15 183 IPR032675 -
Alju03g1342 953 ProSiteProfiles Leucine-rich repeat profile. 264 286 IPR001611 GO:0005515
Alju03g1342 953 FunFam Leucine-rich repeat protein kinase family protein 598 704 - -
Alju03g1342 953 CDD STKc_IRAK 635 901 - -
Alju03g1342 953 FunFam Leucine-rich repeat family protein 26 181 - -
Alju03g1342 953 SMART serkin_6 629 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1342 953 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 705 914 - -
Alju03g1342 953 Pfam Protein kinase domain 630 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1342 953 SUPERFAMILY Protein kinase-like (PK-like) 615 908 IPR011009 -
Alju03g1342 953 MobiDBLite consensus disorder prediction 907 953 - -
Alju03g1342 953 Gene3D Phosphorylase Kinase; domain 1 600 704 - -
Alju03g1342 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 749 761 IPR008271 GO:0004672|GO:0006468
Alju03g1342 953 MobiDBLite consensus disorder prediction 918 937 - -
Alju03g1342 953 ProSitePatterns Protein kinases ATP-binding region signature. 635 661 IPR017441 GO:0005524
Alju03g1342 953 Gene3D Transferase(Phosphotransferase) domain 1 705 917 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1342 Alju-ChrAlju03 41979567 41987190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1342 8 953 Receptor kinase-like Gene Family AT5G49760 53.838 0.0 955
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Alju03g1342 Pkinase 2.2e-48 CL0016