Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1333 ATGCTGAGGGCACAGTTTCTTTTGCTACGGCACCGAGAAAACAAACATATTTTTAATTGCCCATCTTCTCCTTCTGACCTCCTTAACCTTAGTTCTTTTACAGGGAGGACTATTCATCAGATGAGAGAGGGATCTGCAACTGCAAAAATGGCTATCAACCAAGAAGGCAAGGTAGAGGCAGAGTTGTTCCAAGCTCAGGCCCATCTGTATAAACAAGTATTCAATTTCTTGGACTCCATGAGTCTAAAGAGTGCACTGCAGCTGAACATACCAGACATAATCCACAGCCATGGCCGACCCATCACCCTCCCAGAGCTTCTCTCTGCTCTCCAGATGGACCCTGCAAAATCTTCCTATCTCTATAGGCTCATGCGCTTACTGGTTCATTCTGGAATCTTTTCAACTACACAAGTCCCTAAAGATAATGGGGAAGAAGAGGGATATGATCTCACGCCTTCCTCTAGGCTTCTCCTCAAGGACAATGTCCCAAGCTTGTCTCCTTTCGTTCGGGCAATGTTTCATCCAGCTATAGTGCATTCATCGGAATACTTGGGAGATTGGTTTAGCAGTAATGAGCCTACACCCTGTCACACTGCACATGGGATTGGATTTTGGGAATATCTCAACCAAGACCAGGAGTTTAACAGACTCTTTAATGAAGCTATGGTTAGTGATTCAAGCATGATGAACTTGGTAATTAAAGATTGCAAATCAGTTTTTGAGGGATTCAATTCATTGGTTGATGTTGGGGGTGGAAAAGGAGCTGTGTCTAGGATCATATCCGAGTCATTGCCTAACCTGCAGTGCACTGTGCTAGATCTTCCACATGTTGTTGAAAACCTACAAGACAGCAGAAATTTGAAGTACGTTGGAGGGGACATGTTTCAGTCTATTCCTGCAGCAGATGCCATTCTTCTTAAGTTGGTTTTACATGCTTATAGTGATGAAGACTGCGTGAAGGTGCTCAAGAAGTGCAGGGAAGCTATTGCAAGCAAAGGCAAAGAAGGGAAAGTGATTATTATAGACATAGTGATAGATGAGAAGAAAGATGAACATGATCTGAAAGATGCGAAACTCTTCTTCGATGTGTTGATGATGTCTGTGGTGACTGGAAGAGAGAGAGAAGAAAAAGAATGGGAGAAGCTGTTCCTGGATGCTGGGTTCAATTATTATAAGGTAACACCAATTTTTGGCCTTAGGTCGCTGATTGAAGTTTATCCTTAA 1224 0.4297 MLRAQFLLLRHRENKHIFNCPSSPSDLLNLSSFTGRTIHQMREGSATAKMAINQEGKVEAELFQAQAHLYKQVFNFLDSMSLKSALQLNIPDIIHSHGRPITLPELLSALQMDPAKSSYLYRLMRLLVHSGIFSTTQVPKDNGEEEGYDLTPSSRLLLKDNVPSLSPFVRAMFHPAIVHSSEYLGDWFSSNEPTPCHTAHGIGFWEYLNQDQEFNRLFNEAMVSDSSMMNLVIKDCKSVFEGFNSLVDVGGGKGAVSRIISESLPNLQCTVLDLPHVVENLQDSRNLKYVGGDMFQSIPAADAILLKLVLHAYSDEDCVKVLKKCREAIASKGKEGKVIIIDIVIDEKKDEHDLKDAKLFFDVLMMSVVTGREREEKEWEKLFLDAGFNYYKVTPIFGLRSLIEVYP 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1333 407 FunFam O-methyltransferase ZRP4 159 407 - -
Alju03g1333 407 Gene3D Vaccinia Virus protein VP39 158 407 IPR029063 -
Alju03g1333 407 FunFam Coniferyl alcohol 9-O-methyltransferase 52 157 - -
Alju03g1333 407 Pfam O-methyltransferase domain 183 389 IPR001077 GO:0008171
Alju03g1333 407 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 164 406 IPR029063 -
Alju03g1333 407 PANTHER O-METHYLTRANSFERASE 61 391 IPR016461 GO:0008168
Alju03g1333 407 Gene3D - 50 157 IPR036388 -
Alju03g1333 407 PIRSF O-mtase 46 407 IPR016461 GO:0008168
Alju03g1333 407 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 70 407 IPR016461 GO:0008168
Alju03g1333 407 Pfam Dimerisation domain 80 128 IPR012967 GO:0046983
Alju03g1333 407 SUPERFAMILY "Winged helix" DNA-binding domain 58 161 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1333 Alju-ChrAlju03 41909280 41911006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1333 80 405 Monolignol Biosynthesis Gene Families AT5G54160 34.940 7.67e-50 170