Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1327 ATGACATGGTGCAATGAGTCACAAGATGAGGAAGGGATTCAATTAAGCAATTCCAAAATCTCAGAAAAAACTCGAACCATAACTTGCCCTTCATGCGGACATACCCTAGAATTTCAAGATCAGGGGGACATACTTATTAACGGATTGCCGGGGCTGCCATCTGGGGTTAAGTTTGATCCGAACGAGCAAGAGATATTACAGCATTTGGAAGCTAAGATTGAGTGTGATGTTCGTAAGCTTCATCCTCTTATTGATCAATTCATTCCCACTCTTGAAGGCGAGAATGGTATCTGTTATACTCACCCAGAAAAGCTACCAGGAGTAAGCAAAGATGGGCAGATTCGGCACTTCTTCCACAGGCCATCAAAAGCGTACACAACAGGAACAAGAAAAAGAAGAAAGGTTCACTCTACAGATCACGAAGAAGGAGGAGCCGAAACAAGATGGCACAAAACAGGTAAAACAAGACCAGTCTTCGCTAATGGAGCAATCAAAGGGTTCAAGAAGATACTTGTGCTTTACACAAACTATGGAAGAAAAAGGAAGCCTGAAAAAACAAGCTGGGTGATGCATCAGTACCACCTTGGAACCAACGAAGAAGAGAAAGAAGGACAACTCGTGGTGTCCAAGGTTTTCTACCAGACTCAACCTAGACAATGTGGTTCCATTAATAAGGATCATAATTATTATGATGATGATAAAACAGTAGCAATCGACCAAACAGGAAGAACAAGTAATGATCGTGACACGTGCACAACATCATCAATAATAATACCTAATAGTAATAAGAATTATGGATCTGGTGGTGGTGTTTTAGAGTACTACACTTCTCCTTACAATATGAGTAGTTATGAGCATGTGGTGGTGGGTCAGGGTCATAATAGTAATAACGTTAGAGAAAGTTCGCCTCCTCAACTTATTCCCAACTTGGTCGTCCAAGGTGATTCTTCTTTTTTTTCATTTAGCAATGGATTGAAGCAAACTAAGACATGA 993 0.4068 MTWCNESQDEEGIQLSNSKISEKTRTITCPSCGHTLEFQDQGDILINGLPGLPSGVKFDPNEQEILQHLEAKIECDVRKLHPLIDQFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHSTDHEEGGAETRWHKTGKTRPVFANGAIKGFKKILVLYTNYGRKRKPEKTSWVMHQYHLGTNEEEKEGQLVVSKVFYQTQPRQCGSINKDHNYYDDDKTVAIDQTGRTSNDRDTCTTSSIIIPNSNKNYGSGGGVLEYYTSPYNMSSYEHVVVGQGHNSNNVRESSPPQLIPNLVVQGDSSFFSFSNGLKQTKT 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1327 330 Gene3D NAC domain 61 218 IPR036093 GO:0003677|GO:0006355
Alju03g1327 330 MobiDBLite consensus disorder prediction 125 148 - -
Alju03g1327 330 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 15 249 IPR044799 GO:0003700
Alju03g1327 330 MobiDBLite consensus disorder prediction 132 148 - -
Alju03g1327 330 Pfam No apical meristem (NAM) protein 53 195 IPR003441 GO:0003677|GO:0006355
Alju03g1327 330 ProSiteProfiles NAC domain profile. 52 214 IPR003441 GO:0003677|GO:0006355
Alju03g1327 330 FunFam NAC domain-containing protein 73 61 218 - -
Alju03g1327 330 SUPERFAMILY NAC domain 47 214 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1327 Alju-ChrAlju03 41836836 41839832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1327 1 221 NAC Transcription Factor Family AT4G28500 67.391 1.03e-111 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju03g1327 NAM 1.7e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g1327 03 41836836 41839832 Alju03g1327 03 41836836 41839832 ECH