Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1325 ATGCTTCCCCTGTTCTTGCTGCTTTGTTTTCTCTTCCCACCTCCCACTGTCATTTCTCTCAGCCATGATGGTCTCTCCCTCTACAAATTCAAACTCTCCATGAACGACCCCGACTCCTCCCTCTCCTCCTGGAATGACCGCGACGCCCACCCCTGTTCATGGTCCGGCGTCACCTGCGAACCCACCAACACCTCCGTCACCGAGCTCGACCTCTCCAGCTCCAACATCGCCGGCCCATTCCCTGCTTCAATTCTCTGCAACCTCACCAACCTTACCACCCTCATCCTCTACAATAACTCCATTAACGACGCCCTCCCACCGGAAATCGCTCTCTGTCGCAGCCTCGTTCATGTCGACCTCGCCCAGAACCTCCTCACTGGTGCTCTGCCTCCAAACTTATCGGATCTTCCTAACCTCCGGTATCTGGACTTAACCGGCAACAACTTCTCCGGCGTCATACCCGATTCATTTGCCAACTTTCAGAAGCTCGAGGTACTCTCACTTGTCTACAATCTTCTAGACGGAACGATACCCGCTTCTCTCGGAAATATTACCACCCTCAAGATGCTCAACCTCTCTTACAACCCGTTTTTACCGGGTCGGATCCCTCCGGAGATCGGCAACCTGGCGAATCTCGAGGTCATGTGGCTCACTCAGTGTAACTTGGTCGGCGTGATTCCTGGATCGTTCGGCAAGCTGAAGAAACTCAGGGATTTAGACCTGGCGTTGAACAATCTGGATGGTTCGATTCCGAGTTCACTCATTGAGATGACGAGTTTGAAGCAAATTGAGTTGTATAACAACTTGCTGTCCGGCGAGTTGCCTCGGGGAATGGGGAACCTCACGGCATTGAGGTTAGTCGACGTAGCTATGAACCGGTTGAGTGGAACGATTCCAGACGAGTTGTGTCGGTTACCACTGGAAAGCCTTAACCTTTACCAGAATCAGTTTGAGGGTGAGTTGCCGGAGAGCATAGCCGACTCGCCGAATCTTTATGAATTGAGATTGTTTGCTAACAAACTAACCGGAAAACTGCCTAGTAATCTCGGAAAGAATGCGCCTTTGAGGTGGGTTGACGTTTCTAACAATCAATTCTCGGGAGAAATTCCGGCGACTCTGTGTGACAACGGGAAATTGGAAGAGCTTCTAATGATATACAACACTTTTGCCGGTAATATCCCGGCGAGTTTGGGCAGATGTCGGAGTTTGATGCGGGTCCGGCTCGGTTTCAATCGGTTGTCCGGTGAAGTCCCGGCGGCTATTTGGGGGCTTCCACATGTGTATTTACTTGAACTCACTGATAACTCATTTTCTGGTTCAATCGTGAATACTATTTCCGGCGCCGGAAATCTCTCGTTGTTGACTTTATCTAAGAACAATTTCACTGGGCCGATCCCTGAAGAGATTGGATGGCTAGAGAACCTTGAAGAATTCTCTGGTAATGATAATATGTTCAATGGATCATTGCCTGCCAGCATTGTGAAACTCGGACAGCTTGGGACTCTTGATCTTCATAACAATAAAATTTCAGGTGAGCTCCCAAATGGGATTCGATCCTGGAAGAAACTCAATGAGCTTAATCTTGCAAACAATGAGATTGGTGGAAATATTCCTGACGAAATTGGGAGTTTGTCGGTGCTAAATTTTCTTGATCTCTCCAATAATCAATTTTCCGGCGAAGTTCCTGCTGAATTGCAGAATTTGAAGCTCAATAGGTTAAATATGTCTTACAATCATCTCTCTGGAGAACTTCCTCCTATGTTGGCTAAGGATATGTACATGACAAGTTTTCTGGGTAATCCTGGTTTGTGTGGCGATTGGAACAGTTTGTGTTATGGCAGAGATGAAGCTAAGGCAAGAGGGTATTCTTGGTTGCTCCGAATTATTTTCATCATTGCTACTGTTGTCTTCGTTGTAGGTTTGGTCTGGTTTTATTCCAAGTATAAGAACTTTAAAAGGTCAAAAAGAGCCATTGACAAATCAAGATGGACACTGATGTCATTCCATAAACTGGGTTTCAGTGAAGATGAAATTCTGAACTGCCTAGATGATGACAGTGTCATAGGAAGTGGATCATCTGGGAAAGTGTACAAGGTTGTTCTTACCAGTGGGGAGGCTGTTGCAGTAAAGAAGCTATGGGGAGGCATAAAAAAGGAAACGGAAAGTGAGGATATTGAAAGAGGTTGTGTTGAAGACAATGCCTTTGACGCTGAAGTTGAAACATTGGGTAAAATTAGGCACAAAAACATAGTGAAACTTTGGTGTTGCTGCACCACAAGGGACTGCAAGCTCTTAGTTTACGAGTATATGCCGAATGGTAGTCTCGGCGATTCGCTTCATGGAAGTAAAGGTGGGTTGTTGGACTGGCCAACTAGGTATAAGATAGCCCTTGATGCTGCAGAAGGTCTCTCTTATCTGCATCATGACTGTGTTCCTCCAATTGTTCACAGAGATGTAAAATCCAACAATATTCTATTGGATGCCGACTTCGGCGCAAGGGTGGCTGATTTCGGTGTAGCCAAGGTTGTTGAAACCAATGGCAAAGGAACCAAATCCATGTCTGTTATTGCTGGCTCTTGTGGATACATTGCACCAGAATATGCATACACACTGAGGGTGAATGAGAAGAGCGACATATACAGCTTTGGTGTGGTGATACTTGAGTTGGTGACCGGAAGGCGACCAGTTGAGCCGGAGTTTGGGGAGAAGGATTTGGTGAGGTGGGTTTACACGACATTAGACCAGAAAGGAGTGGAGCATGTGATCGACTCGAGGCTGGATTCTTGTTACAAAGATGACATATGTAGGGTTCTTGACATTGGCCTCATGTGCACAAGTTCTCTTCCCATCAACCGCCCCGCCATGAGACGAGTGGTGAAGATGCTGCTAGAGATGGGCTCAGAGAACCAAGCCAAGGCTATCAAGAAAGACGGCAAGTTGTCACCTTATTACTGTGATGATGCCTCAGATCATGGAAGTGTAGCCTAA 2988 0.4679 MLPLFLLLCFLFPPPTVISLSHDGLSLYKFKLSMNDPDSSLSSWNDRDAHPCSWSGVTCEPTNTSVTELDLSSSNIAGPFPASILCNLTNLTTLILYNNSINDALPPEIALCRSLVHVDLAQNLLTGALPPNLSDLPNLRYLDLTGNNFSGVIPDSFANFQKLEVLSLVYNLLDGTIPASLGNITTLKMLNLSYNPFLPGRIPPEIGNLANLEVMWLTQCNLVGVIPGSFGKLKKLRDLDLALNNLDGSIPSSLIEMTSLKQIELYNNLLSGELPRGMGNLTALRLVDVAMNRLSGTIPDELCRLPLESLNLYQNQFEGELPESIADSPNLYELRLFANKLTGKLPSNLGKNAPLRWVDVSNNQFSGEIPATLCDNGKLEELLMIYNTFAGNIPASLGRCRSLMRVRLGFNRLSGEVPAAIWGLPHVYLLELTDNSFSGSIVNTISGAGNLSLLTLSKNNFTGPIPEEIGWLENLEEFSGNDNMFNGSLPASIVKLGQLGTLDLHNNKISGELPNGIRSWKKLNELNLANNEIGGNIPDEIGSLSVLNFLDLSNNQFSGEVPAELQNLKLNRLNMSYNHLSGELPPMLAKDMYMTSFLGNPGLCGDWNSLCYGRDEAKARGYSWLLRIIFIIATVVFVVGLVWFYSKYKNFKRSKRAIDKSRWTLMSFHKLGFSEDEILNCLDDDSVIGSGSSGKVYKVVLTSGEAVAVKKLWGGIKKETESEDIERGCVEDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDSLHGSKGGLLDWPTRYKIALDAAEGLSYLHHDCVPPIVHRDVKSNNILLDADFGARVADFGVAKVVETNGKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPVEPEFGEKDLVRWVYTTLDQKGVEHVIDSRLDSCYKDDICRVLDIGLMCTSSLPINRPAMRRVVKMLLEMGSENQAKAIKKDGKLSPYYCDDASDHGSVA 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1325 995 Gene3D Ribonuclease Inhibitor 177 274 IPR032675 -
Alju03g1325 995 Gene3D Ribonuclease Inhibitor 275 374 IPR032675 -
Alju03g1325 995 Gene3D Ribonuclease Inhibitor 21 176 IPR032675 -
Alju03g1325 995 Pfam Protein kinase domain 685 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1325 995 FunFam Receptor-like protein kinase HSL1 666 769 - -
Alju03g1325 995 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 20 184 - -
Alju03g1325 995 SUPERFAMILY L domain-like 307 604 - -
Alju03g1325 995 Gene3D Ribonuclease Inhibitor 375 612 IPR032675 -
Alju03g1325 995 ProSitePatterns Protein kinases ATP-binding region signature. 688 711 IPR017441 GO:0005524
Alju03g1325 995 Pfam Leucine rich repeat N-terminal domain 21 59 IPR013210 -
Alju03g1325 995 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 187 963 - -
Alju03g1325 995 FunFam Leucine-rich receptor-like protein kinase family protein 202 300 - -
Alju03g1325 995 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 770 979 - -
Alju03g1325 995 SMART LRR_typ_2 136 159 IPR003591 -
Alju03g1325 995 SMART LRR_typ_2 544 567 IPR003591 -
Alju03g1325 995 SMART LRR_typ_2 496 520 IPR003591 -
Alju03g1325 995 SMART LRR_typ_2 233 257 IPR003591 -
Alju03g1325 995 SMART LRR_typ_2 88 112 IPR003591 -
Alju03g1325 995 SMART LRR_typ_2 209 232 IPR003591 -
Alju03g1325 995 SMART LRR_typ_2 281 305 IPR003591 -
Alju03g1325 995 Gene3D Phosphorylase Kinase; domain 1 666 769 - -
Alju03g1325 995 SMART serkin_6 682 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1325 995 ProSiteProfiles Protein kinase domain profile. 682 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1325 995 Gene3D Transferase(Phosphotransferase) domain 1 770 988 - -
Alju03g1325 995 FunFam Receptor-like protein kinase HSL1 306 613 - -
Alju03g1325 995 SUPERFAMILY RNI-like 68 404 - -
Alju03g1325 995 SUPERFAMILY Protein kinase-like (PK-like) 677 962 IPR011009 -
Alju03g1325 995 Pfam Leucine rich repeat 211 270 IPR001611 GO:0005515
Alju03g1325 995 Pfam Leucine rich repeat 137 196 IPR001611 GO:0005515
Alju03g1325 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1325 Alju-ChrAlju03 41803308 41806469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1325 15 995 Receptor kinase-like Gene Family AT1G28440 69.028 0.0 1389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju03g1325 Pkinase 6.5e-42 CL0016