Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1322 ATGGAGGCCGATTCTGTTTCAGACGGCGAGAATAATCGGAAAAGGGACGCCGCTGATGATTACAATGACAACAATAATGGAAGCAACAAAAAAATTGTGAATTCCAATGAAGGGCAGAGCAAGCCCAAGCGTCAGATGAAGACTCCTTTCCAGCTTGATGCCCTAGAGAAAGCTTATGCTTTGGAGACATACCCGTCGGAGGCGATGAGGGCAGAGCTGTCGCAGAAGTTGGGGCTGTCGGATCGGCAATTGCAGATGTGGTTCTGCCATAGGAGGTTGAAAGACAAGAAGGACGTTCCTAAGTCTTCACGAAAGGCCCCACCGCCGTTGCCCACTTCACCGACGGACGACTTGAGGATGGAGACTGAACTCGCCAATGATTATGGATCCGGGTCGGGTTCGGGCTCAAGCCCGTTCACGCGTTCAGAGTTGCGGAATGTAGTACCTAGAGGTGTTCCTGGGTACTATGAGTCGCAGCAGGCTCTTATGGAGCTCAGAGCAATTGCTTGTGTGGAGGCACAATTAGGAGAACCCTTAAGGGAGGATGGACCTATTTTAGGAGTGGAGTTTGATCCATTGCCGCCAGATGCATTTGGAGCACCTATAGCAGTTACTGAGCAGCAGAAGCGGCCTAGTCTTGGCTTTGATAGTAAAGTCTATGAAAGACCTGATGTTAGATCAAATAAGGCTACAAGGGCTTTCCATGAATATCCATTTCTCCCAAACCACTCCAGTATTAGATCTGATGCTTATGGACAATTGACACAATCTCATTTACTTGATCCGATGGATGGTCCGGCAAGAACTCCATCTTTTATGGTCAAAAATGAACAACTCCCCAGGATTCATGCTGCCCAAGGTCCTTCGTCACGTGTTCGTGTTTCATCACTACAAGATAAACAAGGGCTTCCATTTCAATCACCCCCTCATGATGATGATGGTCCCTCTCAAAGGGAATCTTACACAAATCTAAATATTGGAATGAACTCTCACTTTGCTGATCACCCAATTGTTGGACCAGAAAACCCTTATTCTGCAGTGGGTGGACCAATTTTCCATGGCGATGCAATATTACGGGTGGACAGGAAACGAAAGAGTGATGATTCTAGAACTGCGAGAGAAGCTGAAGCCCATGAGATGAGGATCCAGAAGGAGATAGAGAAACAAGATAACATTCGGCGAAAGAATGAAGAAAAAATGAGGAAAGAGATGGAGAGGCAAGATCGAGAAAGAAGGAAGGAAGAAGAGAGGTTGATGCGTGAGAGACAAAGAGAAGAAGAAAGAACAAAGCGTGAACAAAGACGTGAAATTGAACGAAGGGAAAAGTTTTTGATGAAAGAAAATCTAAGAGCTGAGAAAAGGAGGCAAAAAGAAGAGCTTCGAAAAGAGAAAGAAGCAGAGAGAAGGAAAGCTGCTCTTGAGAAGGCAGTTGCCCGCAGAATAGCTAAAGAATCTATGGAGCTTATTGAGGATGAACAACTGGAATTGATGGAGTTGGCTGTGGCAAGCAAGGGACTTCCCTCAATTATAAATCTTGATCTTGACACTTTGCAAAACCTTGACATGTTTCGTGATTCATTATGCATTTTTCCACCTAAGAGTGTAAAGCTGAAAAAACCTTTTGCCATCCAACCCTGGATCAAATCTGAGGAGCGTGTTGGCAACCTTCTCATGGTTTGGAGATTTCTGATTACATTTGCAGATGCCCTTGAGTTGTGGCCATTTACTCTTGATGAGTTTTTGCAGGCATTTCATGACTATGATTCAAGATTATTTGGTGAGATACATGTTGCCCTTCTCAAGGTGATAATAAAGGACATCGAAGATGTTGCAAGGACACCTACAGGATTAGGTACAAACCAGAATGGGGCTGCTAATCCTGGGGGTGGCCATCCAGAGATTGTGGAAGGGGCATATGCATGGGGCTTTGATATAAGAAATTGGCAGAAGCACTTGAATCAATCAACATGGCCAGAAATTTTCCGACAGTTAGCATTATCTGCAGGGTTTGGACCACGGCTGAAGAAAAGAAATATCACATGGTCATATGCAAATGATAAAGATGAGCAGGGTAGAAGTTGTGAAGACGTCATCTCCACACTTCGCAATGGTTCAGCTGCTGAAAATGCAGTCGCAAAAATGCAAGAGAAAGGTCTATTAGCCCCTCGAAGAAATAGGCACCGGTTGACTCCTGGAACAGTCAAGTTTGCAGCATTTCATGTTTTGTCTTTAGAGGGTAGCAAGGGGTTGACCGTACTAGAGCTTGCAGAAAAAATTCAGAAATCTGGACTTCGGGACCTGACAACCAGCAAGACGCCTGAGGCATCAATTTCTGTTGCTTTAACTAGAGATGCTAAGCTTTTTGAAAGAATAGCTCCCTCAACATATCGAGTTCGAGCTGCATATAGAAAAGATCCTGCTGATACGGAGGCCATACTTTCAGATGCTAGAAAGAAAATTCAGATATTTGAAAATGGGTTTTCTGCTGTTGAAGATGCTGATGATGTTGAAAGGGAAGAAGAGTCGGAAAGTGATGAGGTTGATGAGGATCCTGAAGTAGATGATTTAGTAAATCCCCTTAGTGATAACAAAACATCTGAACAATATGATGACCTGAACAATTGCTCTACAAATGCAAGAGAAAATATGAGCCATGACATGGATCTTATTCAAAATGAGTTTGGCAAGGATCTTCCTTGTGTTCCTGAGAATTGTTCCAAGGATGCTGATTGTCCAAGTGCCATCACTGGACAGCGTGGGGTTGTTGAAGATTTGAATACTGGAAATCCTGAAGATAATATGGAAATTGATGAAAGTAAGTCTGGAGAGTCATGGGTTCAAGGTCTTACAGAAGGAGAATATTCTGACCTTAGTGTAGAAGAACGCCTTAATGCTCTAGTAGCATTAGTTGGTGTTGCAAATGAAGGAAATTCAATACGTCTTATTCTTGAGGACCGTTTGGAGGCAGCAAATGCTTTGAAGAAGCAAATGTGGGCAGAAGCACAGATAGATAAAGTTCGGCAGAAAGATGATAATTGTAATAAATCTGATTTTCCATCTCTTACTGCAAATAAAGTCGAGACACAATATACAGGCCCTGCTGCAGAGGGAAACCAGAGCCCGTTGCCTGACATCAATATTAATAATAATGAGGCATCACCCATCACTGCAGAAAATCAAAAAGAAGTTCTCGGTGCACAGAATATGCCTATGGAAAAGCCCTCAGTTGTTCAAGATCTCTTTATGGGTCCAGACAACTTGCAGATTCTATCTGCACATGCTTCAAAAAGGTCTCGTTCACAGTTGAAGTCCTATATTGCGCATATAGCAGAAGAGATGTATGTATATAGGTCCTTGCCCCTTGGTCAAGATCGGAGACGTAACCGATATTGGCAATTTGTTGCATCTGCTTCCAGCAGTGATCCTGGTGCTGGCAGGGTCTTTACTGAATTACATGACGGCAGCTGGAGGCTTATTGATTCTGAAGAGGACTTTGATGCACTTTTGACATCCCTCGATTCACGTGGAATTAGGGAATCTCATTTACGCTTAATGTTGCAGAAGATTGAGAATTCCTTCAAGGAAAATGTTCGAAAGAACGCTCAATTTAACAAAATTGCTACCAAATCAATTAAAAATGAAGTTGATGAAGTGGAACTAGTTCCCGAATGCCGTGCTGGATCAGACAGTTCTAGTAGTACTCTTTGTGGTTTGAATTCTGATAGTACATTGGAAACTTCTTCGTCCTTTAAAATTGAGCTGGGGAGAAGTGAGAGTGAAAAAAAAGCTGCCTTGAGAAGGTATCAAGATGTTCAAAAGTGGATATGGAAAGAATGTTATAATTCATCAACATTATATTCAGTGAAATATGGGCAAAGGAGATGCAAACCACTACTGGAAATATGTGATATGTGTTTGAATCCATACTTCTTTGAAGATTCCCATTGTAATTCTTGCCACCATACTTTTGCTACTAATAATGGATTTAATTTTTCTAAACATGCATTTCAATGTGGAGAGAAGTTAGATTCCAAAGGTATTTGTACTTGGGATTCTTCTCTTCCCTTGCGGATAAGGTTGCTCAAGGGCTTGTTGGCTTGTATTGAGGCTTCTGTTCCTCTTGAAGCATTACAATCAATTTGGACAGAAGAGAATAGGAGGCAGTGGGGAGTGAAATTGAGCAAATCTTCTACAACTGATGAACTCTTGCAGTTACTGACCTTGTTGGAGAGAGTGGTACAGCGAAACTTTCTGTCATCAAACTTCTCTACGACGGAAGAAATGTTGGGTTCAAGCTGTATGCCAGATGATGTAAATGCTTCTACTGATACTGAATCAGTTCCTGTGCTGCCATGGGTACCACAAACCACTGCAGCCATGTCATTGAGAATCTTTGAGTTTGATGCATCTATCAGTTACATACCGGCTGAGAAACCTGAGCTACCTTGTGAAGAGAAAGAAGTGAGGGAATATGTGCAGAAGCTCCCTTCAAGATATGCTCCCTTCAAATCTGGTAGAGCCATTGAATCTGCGGAATTAGACCATGATGAATTCATCAAGGAAGACAAATCTAATAAAAGTGTTCGAGGCAGCAGTAAACGTGGACGAGGGTCTCATGATCAGGGGCGGGGCAAAAAGTTGGCTAGAAGAACACAACATACCGGGCGCCGAAATGCTAAAGGCGCTGAGAATTTGGGTCAAGGAGTAAAACAGCAGGGTAGAGGGACACAAGGAAAACCTGGTGGACGTGGTCGCCGAACAGTCAGGAAAAGAAGATTGGAAAAAAGGGCCGTTGAGGACTTATTGCTGGGCCACAGGGGTGCCGGTCGAAGTCCCAAGATGGGTAGAGAATCGTTGAGAAGTTTGGAAGAGGAATGGGACGGCGAGAAGGAATCAAGTCCCATCCAAATGGATGGTGTTGATAATAGTAACAGTGCTGATGAAGTGGAATCTGATGACAATGGGCAAGCAGTGGAGTATGATGAGCAAGGAAACTGGGAGGTGGGTTTCAATGGTGGTAGTTCCAACAGATGGAATAGGAATATGATTGAAGCGAGCGATGAAGAAGTGGTGGGTGCTTCTGAAGATGACAATGGCATTGAAGAGGGAGAAGAGGAGTTGGAAGAAGATTCGGAGGAAGAGGTTATGAGTGAGGGAGAGGATTCAGACGGTGAGGGCAATAATAGAATGATAGTAAATGAAGAAGAAGAAGGCTCAGACTCGGCTGTCTCTGAGGATTCTTCTGATTAG 5250 0.4326 MEADSVSDGENNRKRDAADDYNDNNNGSNKKIVNSNEGQSKPKRQMKTPFQLDALEKAYALETYPSEAMRAELSQKLGLSDRQLQMWFCHRRLKDKKDVPKSSRKAPPPLPTSPTDDLRMETELANDYGSGSGSGSSPFTRSELRNVVPRGVPGYYESQQALMELRAIACVEAQLGEPLREDGPILGVEFDPLPPDAFGAPIAVTEQQKRPSLGFDSKVYERPDVRSNKATRAFHEYPFLPNHSSIRSDAYGQLTQSHLLDPMDGPARTPSFMVKNEQLPRIHAAQGPSSRVRVSSLQDKQGLPFQSPPHDDDGPSQRESYTNLNIGMNSHFADHPIVGPENPYSAVGGPIFHGDAILRVDRKRKSDDSRTAREAEAHEMRIQKEIEKQDNIRRKNEEKMRKEMERQDRERRKEEERLMRERQREEERTKREQRREIERREKFLMKENLRAEKRRQKEELRKEKEAERRKAALEKAVARRIAKESMELIEDEQLELMELAVASKGLPSIINLDLDTLQNLDMFRDSLCIFPPKSVKLKKPFAIQPWIKSEERVGNLLMVWRFLITFADALELWPFTLDEFLQAFHDYDSRLFGEIHVALLKVIIKDIEDVARTPTGLGTNQNGAANPGGGHPEIVEGAYAWGFDIRNWQKHLNQSTWPEIFRQLALSAGFGPRLKKRNITWSYANDKDEQGRSCEDVISTLRNGSAAENAVAKMQEKGLLAPRRNRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRAAYRKDPADTEAILSDARKKIQIFENGFSAVEDADDVEREEESESDEVDEDPEVDDLVNPLSDNKTSEQYDDLNNCSTNARENMSHDMDLIQNEFGKDLPCVPENCSKDADCPSAITGQRGVVEDLNTGNPEDNMEIDESKSGESWVQGLTEGEYSDLSVEERLNALVALVGVANEGNSIRLILEDRLEAANALKKQMWAEAQIDKVRQKDDNCNKSDFPSLTANKVETQYTGPAAEGNQSPLPDININNNEASPITAENQKEVLGAQNMPMEKPSVVQDLFMGPDNLQILSAHASKRSRSQLKSYIAHIAEEMYVYRSLPLGQDRRRNRYWQFVASASSSDPGAGRVFTELHDGSWRLIDSEEDFDALLTSLDSRGIRESHLRLMLQKIENSFKENVRKNAQFNKIATKSIKNEVDEVELVPECRAGSDSSSSTLCGLNSDSTLETSSSFKIELGRSESEKKAALRRYQDVQKWIWKECYNSSTLYSVKYGQRRCKPLLEICDMCLNPYFFEDSHCNSCHHTFATNNGFNFSKHAFQCGEKLDSKGICTWDSSLPLRIRLLKGLLACIEASVPLEALQSIWTEENRRQWGVKLSKSSTTDELLQLLTLLERVVQRNFLSSNFSTTEEMLGSSCMPDDVNASTDTESVPVLPWVPQTTAAMSLRIFEFDASISYIPAEKPELPCEEKEVREYVQKLPSRYAPFKSGRAIESAELDHDEFIKEDKSNKSVRGSSKRGRGSHDQGRGKKLARRTQHTGRRNAKGAENLGQGVKQQGRGTQGKPGGRGRRTVRKRRLEKRAVEDLLLGHRGAGRSPKMGRESLRSLEEEWDGEKESSPIQMDGVDNSNSADEVESDDNGQAVEYDEQGNWEVGFNGGSSNRWNRNMIEASDEEVVGASEDDNGIEEGEEELEEDSEEEVMSEGEDSDGEGNNRMIVNEEEEGSDSAVSEDSSD 1749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1322 1749 MobiDBLite consensus disorder prediction 1518 1749 - -
Alju03g1322 1749 MobiDBLite consensus disorder prediction 1518 1547 - -
Alju03g1322 1749 MobiDBLite consensus disorder prediction 22 46 - -
Alju03g1322 1749 SUPERFAMILY Homeodomain-like 31 97 IPR009057 -
Alju03g1322 1749 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1117 1189 IPR028941 -
Alju03g1322 1749 MobiDBLite consensus disorder prediction 830 871 - -
Alju03g1322 1749 MobiDBLite consensus disorder prediction 289 303 - -
Alju03g1322 1749 SMART testlast3 550 609 IPR018501 -
Alju03g1322 1749 CDD homeodomain 43 97 IPR001356 GO:0003677
Alju03g1322 1749 MobiDBLite consensus disorder prediction 282 322 - -
Alju03g1322 1749 MobiDBLite consensus disorder prediction 1689 1721 - -
Alju03g1322 1749 Pfam HB1, ASXL, restriction endonuclease HTH domain 732 800 IPR007759 GO:0006355
Alju03g1322 1749 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 941 983 IPR028942 -
Alju03g1322 1749 MobiDBLite consensus disorder prediction 926 945 - -
Alju03g1322 1749 MobiDBLite consensus disorder prediction 362 434 - -
Alju03g1322 1749 MobiDBLite consensus disorder prediction 1722 1736 - -
Alju03g1322 1749 SMART HOX_1 40 102 IPR001356 GO:0003677
Alju03g1322 1749 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 26 1749 IPR044977 GO:0006357
Alju03g1322 1749 MobiDBLite consensus disorder prediction 833 856 - -
Alju03g1322 1749 MobiDBLite consensus disorder prediction 1610 1634 - -
Alju03g1322 1749 MobiDBLite consensus disorder prediction 1 21 - -
Alju03g1322 1749 ProSiteProfiles HARE-type HTH domain profile. 732 801 IPR007759 GO:0006355
Alju03g1322 1749 ProSiteProfiles 'Homeobox' domain profile. 38 98 IPR001356 GO:0003677
Alju03g1322 1749 ProSiteProfiles DDT domain profile. 550 609 IPR018501 -
Alju03g1322 1749 Pfam DDT domain 551 606 IPR018501 -
Alju03g1322 1749 MobiDBLite consensus disorder prediction 1 50 - -
Alju03g1322 1749 Gene3D - 25 100 - -
Alju03g1322 1749 MobiDBLite consensus disorder prediction 95 118 - -
Alju03g1322 1749 Coils Coil 382 477 - -
Alju03g1322 1749 Pfam Homeodomain 41 97 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1322 Alju-ChrAlju03 41754865 41763966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1322 7 1671 Homeobox Transcription Factor Family AT1G28420 49.364 0.0 1352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Alju03g1322 WSD 3.9e-13 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g1322 03 41754865 41763966 Alju03g1322 03 41754865 41763966 CCT
Alju03g1322 03 41754865 41763966 Alju03g1322 03 41754865 41763966 ECH