Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1292 ATGTGGTTTTTTTATCCTGTTGTAGATTTGAGCCTACACATGGAGTCTGAGGGGCAAGAGAGGAACTTGAGCCTAGTTTCTTCTGTAGCAGTAAACCCTGATACAGTGTCTGCAGAAATTAATGACTCATGTAAGGTTCCTACAATGGAAAAAGAAGATTTTCAGCTGGAACATGTGACTCGAAGCAGTCCAAATTCAAGAATTAATGTGGGTTCTGCTGAAGATGATAAACATCGAGGATTAGATGTTGCTAATGAAAGTAATGGATCCCCTCTACAATGTAAAACCTTGGAAGCATACAATGAACCAAGTTGTGATAGCAAAGTTTACTTATGTTGTGCTAAAGAGGCTGGGACAGTCAAGTCATCCAGTGATGCCGAAAAAGATGTGGCTACTGACATCCAGCAGCGAGGCTGCTCTGTTGAGAATGCTTGCATTAGCACTCAGAATTCTATAAACAAAATAAAGCAATTGGACAAGCATTCAGGGGATGAAATGAAGCAAATGACATCAAGATTTTCCAGATTTACTTCCCCTGATATGAGGACTCGAAGTCTTTCTCCCACTGCTGCGGTGAAAGATATAAACAAACGGCCAGCAATTATATGCAGCTTTTTTGCTAAAGGATGGTGTATCAGAGGTAGTTCGTGCAGGTTTCTTCATATAAAAGATAATGTAAATAACACTGGCCTGCAGGCCGAAGGAGATTTGTTTTCTACAAATTGCAAGAGAGAGAGGCAATTGGAGGAAGGCCTGAGAGGTAATGCTGGGACATCAGGCATGCCTGATGCTCCAGTTCCACTGGCTGCTTCATTGTTGAGCTCTTCTTTGCATTCTTCTGAATTTTCGGTAAAAGTGACCATCCAGGATGAACAAGAAGCAAGCCTGAGTCAGCGTCCATCTCAAGATAAACAGAAGTTTTCATTATTTTCGAAAGAGAACTTATCTTTTAAGAACCATGTCTTATCAATTGGTAGAGATAGTTCTGCATCAAAGGATGGCTTGATTCCTGAAAATAGATCTATATTTAATGCATCAAACAACTATTTCAGCAGGAATCTCTCTTCTTATCCATCCTGTGTGGAGGAATTAGCTCCCATTGAAAACAAATATGCTTCCCAAGCTTCAGCTCCATCAAGTTATTCGATGTCTTCAAATTTATCTGTTGGTGCAAGTACTTTGGATGCTCAAAAGCTGTTGAAAAATGGCAAAGAATATCATGCCCCTGGATCCACTTTCTTGGGTTTGGAATGGGAGGAGATGCCTCTAACTAGTTCATCTGGAGGTCGGCTACATGCCACTGGATATAAAAGAAAAATATCTTCTTATGATTGGGAGCCATCTGTACCTTTTCGACCATCATTTTTTATTACTTCAGCCGGTATATCATCTTCTGGAGATATGTATGACCCATTTCATCCTTGTGTTGAGATAACCAATATAGGAGATGGATCCCTGAAAGCTTCCTTTTTCATTCACGGGCCTCCCATCCAGGCTTCATCTCAGGCGCGAACATATGGTGATTGTGCTGTAGCTGGGGACAAGGTGGAAGATATTATTGACGACAAGAGTTCTGTATCTTCTCATCACAGATTTTATGAGAATGAGGCAAACAAGAATTGTGCTCCTTCAGAAAAATATGGCTGTGCACATGAAACAGAGACAACAGCCAGGACCTATCTAAACTCTCAAAATGGTAAAGCAAGCATTGGAGAAAATACCGTTGCTGTTGAAGACAATATAAAAACTGAAGTTGAACAAACAGAGAATGGTGCAAGATATCAAGGTGAAGGATCGGGACTGAAAAAGAGAAGAGTAGATAAGGCTCAGAAAAACAATGAAATGAATGTTGATTTTCAGATGGATGGCAATATGCGGAATGATTCGAAGGCTGTAAAAGTTTTTCGTGCAGCTCTTGTAGATTTAGTGAAAGAGTTGTTAAAACCATCTTGGCAAGAGGGTTATCTCAGCAAGGATGCACATAATACAATAGTAAAGAAATCAGTTGACAAAGTTATTAGCACCCTACAACCCCACCAGATTCCAACCACCATAGATGCAGTCAACCACTATATTTCTTCATCTCGGTTAAAACTTGGAAAGCTTGTTGATGGATATGTCAATAAATACAGCAAGTCTTGA 2142 0.401 MWFFYPVVDLSLHMESEGQERNLSLVSSVAVNPDTVSAEINDSCKVPTMEKEDFQLEHVTRSSPNSRINVGSAEDDKHRGLDVANESNGSPLQCKTLEAYNEPSCDSKVYLCCAKEAGTVKSSSDAEKDVATDIQQRGCSVENACISTQNSINKIKQLDKHSGDEMKQMTSRFSRFTSPDMRTRSLSPTAAVKDINKRPAIICSFFAKGWCIRGSSCRFLHIKDNVNNTGLQAEGDLFSTNCKRERQLEEGLRGNAGTSGMPDAPVPLAASLLSSSLHSSEFSVKVTIQDEQEASLSQRPSQDKQKFSLFSKENLSFKNHVLSIGRDSSASKDGLIPENRSIFNASNNYFSRNLSSYPSCVEELAPIENKYASQASAPSSYSMSSNLSVGASTLDAQKLLKNGKEYHAPGSTFLGLEWEEMPLTSSSGGRLHATGYKRKISSYDWEPSVPFRPSFFITSAGISSSGDMYDPFHPCVEITNIGDGSLKASFFIHGPPIQASSQARTYGDCAVAGDKVEDIIDDKSSVSSHHRFYENEANKNCAPSEKYGCAHETETTARTYLNSQNGKASIGENTVAVEDNIKTEVEQTENGARYQGEGSGLKKRRVDKAQKNNEMNVDFQMDGNMRNDSKAVKVFRAALVDLVKELLKPSWQEGYLSKDAHNTIVKKSVDKVISTLQPHQIPTTIDAVNHYISSSRLKLGKLVDGYVNKYSKS 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1292 713 Gene3D - 190 249 - -
Alju03g1292 713 SMART c3hfinal6 197 223 IPR000571 GO:0046872
Alju03g1292 713 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 22 712 - -
Alju03g1292 713 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 202 221 IPR000571 GO:0046872
Alju03g1292 713 SUPERFAMILY CCCH zinc finger 197 221 IPR036855 GO:0046872
Alju03g1292 713 ProSiteProfiles Zinc finger C3H1-type profile. 197 224 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1292 Alju-ChrAlju03 41484594 41487065 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Alju03g1292 zf-CCCH 6.4e-06 CL0537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g1292 03 41484594 41487065 Alju03g1292 03 41484594 41487065 ECH