Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1271 ATGACGGAAAACATTCGAGGTGCTTCGTCCAGAGGCGATAGGAAAATGATAGAGAGGAACCGTAGAAGCCATATGAGGGCTCTTTGCTCTCAGCTTAGCTCACTCGTCCCTCATCAATCCTCCAAGGAGATGATTTCGCTGCCGGATCAGCTGGATGAAGCCACGAGCCACATAAAGAAGCTTCAGATAAAGTTGGAGAAGATGAGGGAAAAGAAACTCAGCTTAATGGGAATCAACAATAACAAGCCAAACATTTGGGGGAGGCAAAGTTATTATTATAATAATAATAATAGAGGAATCGTTATGGGGTCGAAATCGCCCAAAGTTGAGATTCACCATATGGGTTCAACTTTGAAGGTTTCAGTGATTACTGGGTTGGATTGCCAGTTCATCTTCAACGAGTTCATTCGCATTCTTCTCCAAGAACAAGCTGACGTTGTTACCGCTAGTTATTCAGTCGTTCAAGATGTTGTTTTTCATACCATTCACTCTCAGATAGGAGAAGGTGGTGAGAGAGGTGGGAGGATATCGGAGAGATTAAAGAGGTTTGTGTATGGTTCTGGTGCATTTGATGAAGACAGTGGTAATGGCTTCACTCTTTGGAGTTCTGATGAATTACTATGTGAATAA 630 0.4254 MTENIRGASSRGDRKMIERNRRSHMRALCSQLSSLVPHQSSKEMISLPDQLDEATSHIKKLQIKLEKMREKKLSLMGINNNKPNIWGRQSYYYNNNNRGIVMGSKSPKVEIHHMGSTLKVSVITGLDCQFIFNEFIRILLQEQADVVTASYSVVQDVVFHTIHSQIGEGGERGGRISERLKRFVYGSGAFDEDSGNGFTLWSSDELLCE 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1271 209 Coils Coil 51 71 - -
Alju03g1271 209 SMART finulus 15 67 IPR011598 GO:0046983
Alju03g1271 209 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 11 75 IPR036638 GO:0046983
Alju03g1271 209 Pfam Helix-loop-helix DNA-binding domain 11 62 IPR011598 GO:0046983
Alju03g1271 209 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 61 IPR011598 GO:0046983
Alju03g1271 209 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 185 - -
Alju03g1271 209 Gene3D - 4 84 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1271 Alju-ChrAlju03 41259624 41260514 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1271 7 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 40.884 3.82e-39 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju03g1271 HLH 3.7e-07 No_clan