Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju03g1263 | ATGACGAGTTGGTTCGGGTCCGCTCAGACATCCATGATCGTCACGAACACGCCGTCGCAGGACCTCGCTCTTACCAATCTCGCCTTCTGCTCACCCTCTGATCTTCAGAACTTCGCTATCCCGGGTTTCAAAAACATCTTCCTCGCTCTGCGTCGGTGTGCCAAAGTTTCTGCTGCTGAGTCGATACCTGTGAGCAGATTCGTTCCACCTGAAAATTTCAACCTAGCAATGTTAACCCTTGAGTTGGACTTCATCAAAAAAGGAAGTAAAAGCGAACAGATTGATGCAGTTCAGCTGGGTAAGCAGCTCAAAAAGAGATTTGTAAACCAGGTCATGACTGCAGGGCAGAAGGTGTTGTTTGAGTATCATGGAAATAATTATAGTTTCACAGTCAGTCAAGCTGTTGTTGAGGGTCAAGAAAAAAGTTCTCTTGAAAGGGGGATGCTATTGGATGACACATACATTGTATTTGAAACATCACGTGATAGTGGAATAAAGATTGTCAATCAGCGTGAGGCTGCGACAAGCAACATTTTTAAGCAGAAAGAGTTCAATCTTCAGTCACTGGGTATTGGGGGTTTGAGTGCAGAATTTGCAGATATATTTCGAAGAGCTTTTGCATCTCGTGTTTTCCCTCCACATGTGACTTCTAAACTAGGGATCAAGCATGTGAAGGGAATGCTTCTTTATGGACCTCCTGGCACCGGAAAAACTCTCATGGCACGCCAAATTGGAAAAATTTTGAATGGGAAGGAACCAAAGATTGTAAATGGTCCCGAAGTCTTGAGTAAATTTGTTGGTGAAACTGAGAAGAATGTAAGGGACCTCTTTGCTGATGCTGAAAGGGATCAGAAGACTCTAGGGGATGAAAGTGAATTGCATGTCATAATTTTTGATGAAATTGATGCTATTTGCAAGTCAAGAGGTTCAACTCGAGATGGCACGGGAGTTCATGATAGTATTGTGAATCAACTTCTCACTAAGATAGATGGTGTGGAGTCACTGAATAATGTTTTGCTTATTGGAATGACCAACAGGAAGGACATGCTGGATGAAGCTCTTTTGAGACCGGGGCGACTAGAAGTCCAAGTTGAAATAAGCCTTCCTGATGAAAATGGCCGATTGCAGATTCTTCAAATTCATACTAACAAGATGAAGGACAATTCTTTTTTATCTCCTGATGTGAATCTTCAAGAGCTTGCTGCTCGAACCAAAAACTATAGTGGTGCAGAACTTGAAGGTGTTGTGAAGAGTGCAGTTTCATTTGCTTTAAATAGACAACTTAGTCTAGATGATCTCACTAAGCCAGTGGAGGAAGAGAATATCAAGGTTACAATGGATGATTTTTTGAATGCACTTCATGAAGTTGTTCCTGCATTTGGAGCTTCAACTGATGACCTTGAGAGATGCAGACTTGGTGGCATGGTGGATTGTGGTGATAGACATAAGCACATTTACCAAAGAGCTATGCTACTTGTGGAGCAAGTTAAAGTGAGCAAAGGAAGCCCACTTGTTACTTGTCTTTTGGAAGGCCCTAGTGGCAGTGGTAAAACTGCACTTTCAGCTACTGTTGGCATCGACAGCGATTTCCCATATGTCAAGATTGTTTCAGCTGAATCAATGATTGGTCTCCACGAAAGCACTAAATGTGCACAGATTATCAAGTTTTTTGAGGATGCATACAAGTCACCATTGAGCGTCATTATTCTTGATGACATTGAGAGATTATTGGAGTATGTAGCCATTGGTCCACGGTTTTCAAATTTGATTTCTCAGACACTACTGGTCCTGCTAAAACGGCTTCCTCCAAAGGGGAAAAAGCTCCTGGTTATTGGTACAACAAGTCAACTAATTTTCTTGGACTCAATTGGATTCTGTGATACTTTCTCTGTCACTTACCACGTTCCTACATTGAACACAAATGATGTGAAGAAGGTTCTAAAACAGTTGAATGTCTTCGATGAGGGTGATGTTGATGATGCTGCGGAGGCCCTGAATGATATGCCTATCAAGAAGCTATACACGTTGACTGAGATGGCGGCCCAAGGTGAACGTGGTGGATCTGCAGAAGCAATCTATTCTGGCAAAGAGAAGATAAAGCTCTCTCACTTCTATGATTGCCTTCAGGATGTCGTCCGAGTATGA | 2145 | 0.4238 | MTSWFGSAQTSMIVTNTPSQDLALTNLAFCSPSDLQNFAIPGFKNIFLALRRCAKVSAAESIPVSRFVPPENFNLAMLTLELDFIKKGSKSEQIDAVQLGKQLKKRFVNQVMTAGQKVLFEYHGNNYSFTVSQAVVEGQEKSSLERGMLLDDTYIVFETSRDSGIKIVNQREAATSNIFKQKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKILNGKEPKIVNGPEVLSKFVGETEKNVRDLFADAERDQKTLGDESELHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKDNSFLSPDVNLQELAARTKNYSGAELEGVVKSAVSFALNRQLSLDDLTKPVEEENIKVTMDDFLNALHEVVPAFGASTDDLERCRLGGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALSATVGIDSDFPYVKIVSAESMIGLHESTKCAQIIKFFEDAYKSPLSVIILDDIERLLEYVAIGPRFSNLISQTLLVLLKRLPPKGKKLLVIGTTSQLIFLDSIGFCDTFSVTYHVPTLNTNDVKKVLKQLNVFDEGDVDDAAEALNDMPIKKLYTLTEMAAQGERGGSAEAIYSGKEKIKLSHFYDCLQDVVRV | 714 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju03g1263 | 714 | Gene3D | - | 176 | 368 | IPR027417 | - | |
Alju03g1263 | 714 | FunFam | Vesicular-fusion ATPase SEC18 | 179 | 369 | - | - | |
Alju03g1263 | 714 | Gene3D | - | 466 | 636 | IPR027417 | - | |
Alju03g1263 | 714 | FunFam | Vesicle-fusing ATPase | 71 | 167 | - | - | |
Alju03g1263 | 714 | Pfam | AAA+ lid domain | 394 | 449 | IPR041569 | - | |
Alju03g1263 | 714 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 467 | 674 | IPR027417 | - | |
Alju03g1263 | 714 | SUPERFAMILY | Cdc48 domain 2-like | 70 | 172 | IPR029067 | - | |
Alju03g1263 | 714 | SMART | AAA_5 | 503 | 624 | IPR003593 | GO:0016887 | |
Alju03g1263 | 714 | SMART | AAA_5 | 223 | 370 | IPR003593 | GO:0016887 | |
Alju03g1263 | 714 | FunFam | Vesicle-fusing ATPase | 369 | 456 | - | - | |
Alju03g1263 | 714 | CDD | RecA-like_NSF-SEC18_r1-like | 190 | 366 | - | - | |
Alju03g1263 | 714 | PANTHER | VESICULAR-FUSION PROTEIN NSF | 10 | 713 | IPR039812 | GO:0016887|GO:0035494 | |
Alju03g1263 | 714 | SUPERFAMILY | ADC-like | 11 | 70 | IPR009010 | - | |
Alju03g1263 | 714 | FunFam | vesicle-fusing ATPase isoform X1 | 465 | 636 | - | - | |
Alju03g1263 | 714 | Gene3D | - | 369 | 456 | - | - | |
Alju03g1263 | 714 | Gene3D | - | 7 | 66 | - | - | |
Alju03g1263 | 714 | Pfam | ATPase family associated with various cellular activities (AAA) | 508 | 616 | IPR003959 | GO:0005524|GO:0016887 | |
Alju03g1263 | 714 | Pfam | ATPase family associated with various cellular activities (AAA) | 227 | 367 | IPR003959 | GO:0005524|GO:0016887 | |
Alju03g1263 | 714 | ProSitePatterns | AAA-protein family signature. | 338 | 356 | IPR003960 | GO:0005524|GO:0016887 | |
Alju03g1263 | 714 | Gene3D | - | 70 | 167 | - | - | |
Alju03g1263 | 714 | Pfam | Cell division protein 48 (CDC48), domain 2 | 93 | 138 | IPR004201 | - | |
Alju03g1263 | 714 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 202 | 466 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju03g1263 | Alju-ChrAlju03 | 41142352 | 41150638 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju03g1263 | 191 | 442 | Calmodulin-binding Proteins | AT3G56690 | 33.858 | 4.75e-30 | 125 |