Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju03g1254 | ATGAGTGAAGTCTATGAGCGTATATCAAATGAAATTCGATTTTCTTCGGTTTCTCGATATAAACCCCAACATTCTGGAAATGAAAGACGGTTCAATGCTCTGGATTTTTCTTCTTCTGTGATTGGAGGTTCTGATAGGGTGGCTGATCTATCTGGCATCTGATTCATGGCCTTTGAGCACTACATTTCACAAGAATGGAAAAGCATTCCAAGTTCCATGACGAAAGAGACTGGAAATCACAATAGTTGTTTCGATTGCAACATTTGCTTTGACTTTGCTATTGAACCTGTGGTCACCCTCTGTGGTCACCTCTATTGCTGGCCGTGCATCTACAAGTGGCTCCATGTCCAAAGTGCTTCTCTTCCATCCGATGAGCACCCACAATGCCCAGTCTGCAGGGCTGATATATGTCCCACTACCTTGGTCCCCCTATATGGCCGGGGCCAAAACCCGGCTCCTCCCGAGCAAGACACAAAGGCATCGCGTGAGATTTTGATACCACCAAGACCACGAGCTTTTGGCGCTCAAGCTCTGATGTTAGCATCAGCATCATCATCATCATCTCAAGGTGGTCATCATCAGCATCATCCTTATCATTATCCTCATCACAGTCATCAACATTTCAGCTCTCCTCTGTACCAAAGGGTGGAGGATGCCTCATCACAAGTGCTGAATCTCAGCACTACTCTTACACCTCAAGGATTTCACCACCCTGTGGCTGGGATGGTTTATGCCACGGTGTTTGGCAGCCCGGAAAATTTATACGCGTACCCGAATTCTTATCAGCAGATGGGCAGTAACAGCCCGAGACTGAGAAGGCAGGTGATGCAAGCAGATAAGTCATTGAACAGAATCTCAATCTTCCTCTTTTGCTGTTTTGTTTTATGTCTCATTGTATTTTGA | 903 | 0.4574 | MSEVYERISNEIRFSSVSRYKPQHSGNERRFNALDFSSSVIGGSDRVADLSGIXFMAFEHYISQEWKSIPSSMTKETGNHNSCFDCNICFDFAIEPVVTLCGHLYCWPCIYKWLHVQSASLPSDEHPQCPVCRADICPTTLVPLYGRGQNPAPPEQDTKASREILIPPRPRAFGAQALMLASASSSSSQGGHHQHHPYHYPHHSHQHFSSPLYQRVEDASSQVLNLSTTLTPQGFHHPVAGMVYATVFGSPENLYAYPNSYQQMGSNSPRLRRQVMQADKSLNRISIFLFCCFVLCLIVF | 300 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju03g1254 | 300 | ProSitePatterns | Zinc finger RING-type signature. | 101 | 110 | IPR017907 | - | |
Alju03g1254 | 300 | SUPERFAMILY | RING/U-box | 85 | 139 | - | - | |
Alju03g1254 | 300 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED | 63 | 297 | IPR045103 | GO:0005783|GO:0006511|GO:0061630 | |
Alju03g1254 | 300 | SMART | ring_2 | 86 | 132 | IPR001841 | - | |
Alju03g1254 | 300 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 58 | 147 | IPR013083 | - | |
Alju03g1254 | 300 | ProSiteProfiles | Zinc finger RING-type profile. | 86 | 133 | IPR001841 | - | |
Alju03g1254 | 300 | MobiDBLite | consensus disorder prediction | 185 | 206 | - | - | |
Alju03g1254 | 300 | Pfam | Zinc finger, C3HC4 type (RING finger) | 86 | 132 | IPR018957 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju03g1254 | Alju-ChrAlju03 | 41067313 | 41070593 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju03g1254 | 61 | 286 | C3H Transcription Factor Family | AT4G27470 | 38.034 | 4.41e-41 | 141 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Alju03g1254 | 03 | 41067313 | 41070593 | Alju03g1254 | 03 | 41067313 | 41070593 | ECH |