Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1232 ATGACAGGTCGACGCTTCTACAAAAAAACCGAGAAGGATCTAGGTGGGAAATCTCCCAATGAGTGGAAGAAGAAGTCCGAGCTTGCGACCTGGACCATTATGAGTTGTGGCTGCTTTGGAGCCTCAACTATAAAGAGGAGAAGGAGTCCTACTCATAATCCTAATGACGTTGATGGCGTTGCACTTGATAATGTTAAGAATTTCTCCGATAAAGAACTAAGGTTGGCAACAGATAATTATGACTCAAGGAACAGGATAGGAAGGGGAGGTTTCGGAACTGTTTACCAGGGAACCTTGAGGGATGGAAGACGGATAGCAGTGAAGACCCTTTCTACAGGATCAAGGCAAGGAGTCCGTGAATTTTTAACTGAAATCAATACTATATCAAATGTTAAGCATCCAAACCTTGTTGAATTGATTGGTTGCTGTGTTCAAGAATCTAATCGTATTTTAGTGTACGAGTACGTGGAAAATAACAGCCTTGATCATGTATTACTTGGCACAAGGAATACAGGCATCAAACTAGACTGGAGAAGAAGATCTGCAATTTGCATGGGTACAGCTAGGGGTCTTGCATTCCTTCATGAGGAACTTGTTCCACACATTGTGCACAGAGACATCAAAGCTAGCAACATACTACTTGACAAAGACTTTAACCCGAAAATAGGAGACTTTGGCTTGGCTAAATTATTTCCTGATGACATCACTCATATTAGCACTAGAATTGCTGGAACAACCGGTTATCTAGCACCAGAGTATGCATTAGGTGGTCAGTTAACCATGAAGGCTGATGTATACAGCTTTGGAGTTCTTGTACTAGAAATAATTAGTGGCAAAAGCAGTTCAAGATCATATTGGGGGGGAACTGACAAAGTCCTCCTGGAATGGGCTTGGCTACTTCATGAAGAAGGGAGACTTTTAGAGCTAGTGGATCCGGAGATTGGAGAATTTCCTGAGGAAGAAGTGATTAGATACATGAAGGTAGCTTTTTTCTGCACACAGGTGGCAGCAAACAGAAGGCCACTGATGTCCCAGGTTGTCGATATGTTGTCCAGGAAAATCCGGCTCAACGAGAAGGAGCTAACAGCACCAGGATTCTTCCAGAATTCAGGAGAATCCTCTAAAAAGAACCTATCCAGTGGGTCTACTAGCAATCAGACTCATTCTCTTCCTCCCACTATAACTCAGGTGACCCCTCGATGA 1203 0.4306 MTGRRFYKKTEKDLGGKSPNEWKKKSELATWTIMSCGCFGASTIKRRRSPTHNPNDVDGVALDNVKNFSDKELRLATDNYDSRNRIGRGGFGTVYQGTLRDGRRIAVKTLSTGSRQGVREFLTEINTISNVKHPNLVELIGCCVQESNRILVYEYVENNSLDHVLLGTRNTGIKLDWRRRSAICMGTARGLAFLHEELVPHIVHRDIKASNILLDKDFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYALGGQLTMKADVYSFGVLVLEIISGKSSSRSYWGGTDKVLLEWAWLLHEEGRLLELVDPEIGEFPEEEVIRYMKVAFFCTQVAANRRPLMSQVVDMLSRKIRLNEKELTAPGFFQNSGESSKKNLSSGSTSNQTHSLPPTITQVTPR 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1232 400 MobiDBLite consensus disorder prediction 1 20 - -
Alju03g1232 400 MobiDBLite consensus disorder prediction 365 400 - -
Alju03g1232 400 FunFam Putative LRR receptor-like serine/threonine-protein kinase 156 362 - -
Alju03g1232 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Alju03g1232 400 Pfam Protein kinase domain 81 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1232 400 ProSiteProfiles Protein kinase domain profile. 80 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1232 400 Gene3D Phosphorylase Kinase; domain 1 52 155 - -
Alju03g1232 400 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 45 384 - -
Alju03g1232 400 SMART serkin_6 80 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1232 400 SUPERFAMILY Protein kinase-like (PK-like) 65 372 IPR011009 -
Alju03g1232 400 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Alju03g1232 400 CDD STKc_IRAK 86 352 - -
Alju03g1232 400 FunFam cold-responsive protein kinase 1 51 155 - -
Alju03g1232 400 Gene3D Transferase(Phosphotransferase) domain 1 156 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1232 Alju-ChrAlju03 40838856 40848008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1232 43 392 Receptor kinase-like Gene Family AT1G56120 49.020 4.92e-107 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju03g1232 Pkinase 2.7e-45 CL0016