Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1194 ATGGATAGTACCGATTCGTGTTCAGGGTATCAGAATCCTCAGCTTCCTCCTGGATTCCGATTTCATCCCACCGACGAAGAGCTCGTCGTTCACTACTTGAAGCGAAAAGCGGCCTCTGCTCCACTTCCCGTCGCCATTATCGCCGACGTCGATCTCTACAAGTTCGATCCCTGGGAGCTTCCAAGTAAGGCAGCGTTTGGGGAGCAAGAGTGGTACTTCTTCAGCCCGAGAGATCGCAAGTATCCAAATGGAGCCAGGCCAAACAGGGCAGCCACTTCGGGATATTGGAAAGCCACCGGAACAGACAAGCCGATATTGTCGTCGGACGGCCGAAACCACAAAGTCGGCGTGAAGAAAGCCCTGGTTTTCTACGGCGGAAAACCTCCAAAAGGCGTTAAAACCAACTGGATCATGCATGAATATAGACTCATTGACAACAATTCTTATAATAATTCTATCCCTAAGCCTCCTCCTCTGGCTTCCGATCCAGCCTCACAATTCACCAAGAAAAACTCCTTAAGGCTTGATAACTGGGTTTTGTGTCGAATATACAAGAAAAGCAACAGTAATATGAATACTAGTTTACAAAGGCAGCCATTAATGGAGCAGGAGAGGGAGATTTGTATGGAGGCTATGATTCCCACAATCTCAAGTTTATCAATGGCTAATGGAATTGGGAATAATGATGACAACTTGTTCGACGGAATTCTGGGAATCGGCGGCGGCGACGGAGGAGGCTGCGGTGGTGGTGAAGAATCTCATGATCATCATCATCATCATCACTTGCTATCGTCAAACTCATCCAAGGCAGTGAAACGACCCCTGGCATCGGCGTTTTGGAACGAGACGGTGGGGTCACCGTCGGGGTCGTCTTCGTCAAGCAAGAGATTCCACGGTGATCTAAACAGTGGGGGGATGAGTACTACCTCGGCCGATGAGAACAGCTCGTTCATTTCTCTGCTAAGCCAGCTTCCTCCTCATCATCAGAATACGACGACGTTTCTTGGCTCTGTCGGTGACGGCGTTTTGAGGCAGCAGTTTCAGCTTCCAAGCATGAATTGGACCTCATAA 1071 0.4911 MDSTDSCSGYQNPQLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIADVDLYKFDPWELPSKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILSSDGRNHKVGVKKALVFYGGKPPKGVKTNWIMHEYRLIDNNSYNNSIPKPPPLASDPASQFTKKNSLRLDNWVLCRIYKKSNSNMNTSLQRQPLMEQEREICMEAMIPTISSLSMANGIGNNDDNLFDGILGIGGGDGGGCGGGEESHDHHHHHHLLSSNSSKAVKRPLASAFWNETVGSPSGSSSSSKRFHGDLNSGGMSTTSADENSSFISLLSQLPPHHQNTTTFLGSVGDGVLRQQFQLPSMNWTS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1194 356 SUPERFAMILY NAC domain 10 186 IPR036093 GO:0003677|GO:0006355
Alju03g1194 356 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Alju03g1194 356 MobiDBLite consensus disorder prediction 247 269 - -
Alju03g1194 356 ProSiteProfiles NAC domain profile. 15 186 IPR003441 GO:0003677|GO:0006355
Alju03g1194 356 Gene3D NAC domain 24 191 IPR036093 GO:0003677|GO:0006355
Alju03g1194 356 PANTHER NAC TRANSCRIPTION FACTOR 56 15 245 - -
Alju03g1194 356 MobiDBLite consensus disorder prediction 284 312 - -
Alju03g1194 356 FunFam NAC transcription factor 56 24 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1194 Alju-ChrAlju03 40390074 40391463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1194 5 356 NAC Transcription Factor Family AT1G61110 52.589 6.36e-109 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju03g1194 NAM 5.1e-40 No_clan