Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1185 ATGGATATTGTATTAAAAATGAAAATTTTCTGCAGATTTGCTCTTGTACTTGTGCCATTATTATGTGCGAAGCCCGTTGCATGTTTGAGAAACAAGCAATATCATGGTGGGAGGAAAATGGGTTCTGGGGATAATAACGAGGATCTTGTCACCAGCTTACCTGGTCAGCCTCATGCAGATTTCAACCACTTTGCTGGCTATGTCACAGTGAACGAAACTAATGGAAGAGCACTCTTTTACTGGTTTTATGAGGCAATCGACAATCCTCAGGAGAAACCCTTAGTGCTTTGGCTTAATGGAGGACCTGGGTGCTCTTCTGTGGGATATGGAGCAACACAAGAGATTGGTCCTTTTTTAGTGGACACTAATGGCCAGGGTCTTAAAGATAATAACTTCTCATGGAACAGAGAAGCCAACATTTTATTCGTGGAATCTCCAGTCGGTGTCGGCTTTTCCTACTCAAACACAACCAGTGATTATGAACATCTTGGAGATGACTTCACAGGTAACGATGCTTACAATTTTCTGCACAAGTGGTTCCTCAAGTTTCCTTCTTACAGAACTAGGACATTTTACATAGCAGGAGAGAGTTATGCAGGAAAGTATGTACCTGAGCTTGCTGAGCTCATCGTTGATAGGAACATGGACCCTTCGCTTCATATCAATCTTAAGGGTATCCTGCTGGGTAATCCAGAAACATCTGATGCGGAGGATTGGATGGGTATAGTGGATTATGCTTGGAGCCACGCGGTGATATCAGATGAATTACATAGAGAAATAAGAGAAAGTTGTGACTTTAAAAGCAGTGATCCATGGAAAAACCAAACATGTTGTGATGCTGTTGATGAATTGCTTGCACAGTACCACAAGATTGATATGTATAGTCTCTACACACCTGTCTGCTTCGCCTCTACTGCTTCAAGTTCCAATAATAATCAATATTATGTGCAAGGTTTCATGAGTTATAAACGCACGGTGAAAATGATGCCTAGGATAATGGGTGGTTTTGATCCTTGTTTGGATGATTACGCCACAGCTTTCTACAACAGACCAGATGTTCAGAAGGCTCTTCATGTTAGCAATGGTCATAGCATTAAGAATTGGAGTATTTGCAACTACAATGTATTCTACCACTGGAAAGATTCAAAGCCATCTGTTATCCCAATTTACAAGAAGCTTATTTCGTCAGGACTGAGAATCTGGGTTTACAGTGGAGACACAGATGGGAGAGTGCCAGTACTGTCCACTAGATACAGCTTAAGGGCTCTGAATTTGAGTATCACCAAGACATGGAGACCATGGTATCACGATAATGAGGTAAGTGGATGGTTTCAAGAATACGAGGGGCTCACTTTTGCAACGTTTAGAGGAGCAGGACATGATGTGCCCAGTTTCAAACCAAGCAATTCACTTGCATTCTTCTCCTCCTTTCTGCTCGGACAGTCCCCACCAGAAACTAAATAA 1464 0.4194 MDIVLKMKIFCRFALVLVPLLCAKPVACLRNKQYHGGRKMGSGDNNEDLVTSLPGQPHADFNHFAGYVTVNETNGRALFYWFYEAIDNPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTNGQGLKDNNFSWNREANILFVESPVGVGFSYSNTTSDYEHLGDDFTGNDAYNFLHKWFLKFPSYRTRTFYIAGESYAGKYVPELAELIVDRNMDPSLHINLKGILLGNPETSDAEDWMGIVDYAWSHAVISDELHREIRESCDFKSSDPWKNQTCCDAVDELLAQYHKIDMYSLYTPVCFASTASSSNNNQYYVQGFMSYKRTVKMMPRIMGGFDPCLDDYATAFYNRPDVQKALHVSNGHSIKNWSICNYNVFYHWKDSKPSVIPIYKKLISSGLRIWVYSGDTDGRVPVLSTRYSLRALNLSITKTWRPWYHDNEVSGWFQEYEGLTFATFRGAGHDVPSFKPSNSLAFFSSFLLGQSPPETK 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1185 487 ProSitePatterns Serine carboxypeptidases, serine active site. 193 200 IPR018202 GO:0004185
Alju03g1185 487 FunFam Carboxypeptidase 386 480 - -
Alju03g1185 487 FunFam Carboxypeptidase 44 303 - -
Alju03g1185 487 SUPERFAMILY alpha/beta-Hydrolases 45 482 IPR029058 -
Alju03g1185 487 Pfam Serine carboxypeptidase 57 478 IPR001563 GO:0004185|GO:0006508
Alju03g1185 487 Gene3D - 339 375 - -
Alju03g1185 487 Gene3D alpha/beta hydrolase 44 303 IPR029058 -
Alju03g1185 487 FunFam Carboxypeptidase 337 482 - -
Alju03g1185 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 143 153 IPR001563 GO:0004185|GO:0006508
Alju03g1185 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 142 IPR001563 GO:0004185|GO:0006508
Alju03g1185 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 450 463 IPR001563 GO:0004185|GO:0006508
Alju03g1185 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 204 IPR001563 GO:0004185|GO:0006508
Alju03g1185 487 Gene3D - 386 480 - -
Alju03g1185 487 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 49 467 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1185 Alju-ChrAlju03 40223369 40227413 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1185 344 481 Calmodulin-binding Proteins AT2G22960 36.691 2.59e-20 86.7