Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1184 ATGAAAATTTTCTGCAGATTGGCTCTTGTCCTTGTGCTATTATTATGTGCGAAGTCCGTTGTATCGTCTTCGAGACACAGGCAATATTATAGGAAGCTGAGTTCTGGGGATAGTAATAATGAAGATCTTGTCACTAACTTACCTGGTCAGCCTCATGCAGATTTCAAGCACTTTGCTGGCTATGTCACAGTCAATGAAACTAATGGAAGAGCACTCTTTTACTGGTTTTATGAGGCCATCACCAATCCTCAAGATAAACCCTTAGTGCTTTGGCTTAATGGAGGACCTGGGTGTTCTTCAGTGGGATATGGAGCAACACAGGAGATTGGTCCTTTTTTAGTGGACACTAATGGCCAGGGTCTTAAATATAATAACTTCTCGTGGAACAGAGAAGCCAATGTTTTGTTCGTGGAATCTCCTATTGCGGTTGGCTTTTCCTACTCAAACACAACCAGTGATTATGAACATATTGGAGATGACTTCACAGCCAACGATGCTTACAATTTCCTCCACAAGTGGTTCCTCAAGTTTCCATCTTACAGAACTAGGACATTTTACATAGCAGGAGAGAGTTATGCAGGGAAGTATGTACCTGAGCTTGCTGAGCTCATCGTTGACAGTAACAAGGACCCTTCACTTCATATTGATCTTAAGGGTATCCTGCTGGGAAATCCAGAAACATCTGATGCTGAGGACTGGAAGGGAATTGTGGATTATGCGTGGAGCCACGCAGTGATATCGGATGAAACATACCTGACAATAAGAGAAAGCTGTGACTTCAAAAGCAATGATCCATGGAAGAACCAAACTTGTTGTGATTCTGTGGATGAAGTGTTCTCTCAGTACGGCAAGATTGATATCTATAGCATCTATACCTCTGTCTGCTTTGCCTCTACTGCTCGCTCCAATATTGATCAATCTCAGTCTCTACAAGGCCGACGCGTCATGAAATATAAACGTTCTTCCAAAATGATGCCGAGGATTATGGGTGGTTATGATCCATGTTTGGACGATTATGCGAGAGCTTTCTATAACAGGCCAGATGTTCAGAAAGCTCTTCATGCCAGTGATGGTCACAGTCTTAAGAATTGGAGTATTTGCAACGACAAGATGTTCAACGATTGGGGAGATTCAAAGCCATCCATGATCCCAATTTACAAGAAGCTTATTTCGGCAGGACTTAGAATCTGGGTTTACAGTGGAGACACAGATGGGAGAGTGCCAGTACTGTCCACAAGATACAGCTTAAGCACTCTGAATTTGCGAATCACCAAGCCATGGAGACCATGGTATCACGAGAACGAGGTAAGTGGGTGGTTTCAAGAGTACGAGGGGCTGACTTTTGCGACGTTTAGAGGAGCAGGACATGCAGTGCCTTGCTTCAAACCAAGCAATTCACTCGCACTCTTCTCTTCTTTTCTTCTCGGACAATCACCACCTTCTACTAAATAA 1452 0.4332 MKIFCRLALVLVLLLCAKSVVSSSRHRQYYRKLSSGDSNNEDLVTNLPGQPHADFKHFAGYVTVNETNGRALFYWFYEAITNPQDKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTNGQGLKYNNFSWNREANVLFVESPIAVGFSYSNTTSDYEHIGDDFTANDAYNFLHKWFLKFPSYRTRTFYIAGESYAGKYVPELAELIVDSNKDPSLHIDLKGILLGNPETSDAEDWKGIVDYAWSHAVISDETYLTIRESCDFKSNDPWKNQTCCDSVDEVFSQYGKIDIYSIYTSVCFASTARSNIDQSQSLQGRRVMKYKRSSKMMPRIMGGYDPCLDDYARAFYNRPDVQKALHASDGHSLKNWSICNDKMFNDWGDSKPSMIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSTLNLRITKPWRPWYHENEVSGWFQEYEGLTFATFRGAGHAVPCFKPSNSLALFSSFLLGQSPPSTK 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1184 483 Pfam Serine carboxypeptidase 51 475 IPR001563 GO:0004185|GO:0006508
Alju03g1184 483 SUPERFAMILY alpha/beta-Hydrolases 39 478 IPR029058 -
Alju03g1184 483 ProSitePatterns Serine carboxypeptidases, serine active site. 187 194 IPR018202 GO:0004185
Alju03g1184 483 Gene3D - 382 476 - -
Alju03g1184 483 Gene3D alpha/beta hydrolase 38 297 IPR029058 -
Alju03g1184 483 FunFam Carboxypeptidase 38 297 - -
Alju03g1184 483 Gene3D - 335 371 - -
Alju03g1184 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Alju03g1184 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Alju03g1184 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Alju03g1184 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Alju03g1184 483 FunFam Carboxypeptidase 382 476 - -
Alju03g1184 483 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 43 463 IPR001563 GO:0004185|GO:0006508
Alju03g1184 483 FunFam Carboxypeptidase 332 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1184 Alju-ChrAlju03 40181828 40185426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1184 340 477 Calmodulin-binding Proteins AT2G22960 34.532 5.37e-17 77.4