Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1160 ATGGATGTTGGATCTATAGTAAGCATCCTGAACTGTTTGTGCTCTCCGAACTCGCTGCAACAAACTCTTGAGCGACAGTGTAGGCATCTTAGAAAGCCAAGAAAGAATCTGAACAAGCTAAAAGAGTTAGTGGAACAGCTAGATGCTCGTAGATCAGATTTGAACACTAAACTAAATCAAATGTGGCTGGAAAAAGGGATGAATCCACGGGAAGAGGTAAAGCTGTGGATGAAAAGTGTTGATCGAGTTAAAAGCCAAGTGAGCACCCTCATGGAGAGTAACAATGGGTGTTCCTTCAACTTTGTTTGCTCAAGAATAAAATTAGGAGGAGTAGTAGAAGAAAAGATCAGCGAGGTTAAAGAGCTTCTTGACAATGGTCAGTTCTTGGATTATTTAGTGGCTGAAAACTTGCCTAAGGTAGGGTACACTCTTCCTTCGCCGCCATTAATGGAGTGTGTCACAACGATGAAGAGTTTAACGAGGATATTGGAATGCTTATCACTACAGAGAGTGAAAAGGATTGGAGTTTATGGGATGGGAGGAGTAGGCAAAACAACTATCATGAAAGAAATCCACAATCGTCTTTTAGAAGGGAGAGATTTTGATCATGTCATTTGGGTTTCTGCACCAAAAGAGCCAAGTCCTGTGAAACTACAAAAGGGCATTGGAGAGAAGCTAGATTTAGATCTTTCAATGATCGACGATGATGTTACAAGAGCAGCCAAGCTATTTGAGGCTTTAAGCAGAAGGAAGAGATACACATTGATTCTGGATGATTTATGGGAGCACTTCTCTCTTGAAACGGTTGGAATACCGATACCAACAACAGAGAATGGTTGTAAGTTGGTGATCACTACGCGATTGTTGAGTGTTTGTCGAGGTATGGAGACAGATGATGATGTAGAAGTGAAGGCCCTTCAAGATGATGAGGCATGGGATCTCTTAAGGTCTAAAGTTGGACCAGTATTGTCAAATTCTGCAGAAGTAGAGATGATTGCAAGGGAAGTAACAAAAGAATGTGGAGGTTTGCCTCTTGCTATTGTCACAGTAGGACGAGCCTTGAGAAATGCTGCTGACGTATCAGAGTGGGAGTGTGCATTAGATGAGCTAAGAGCTTCAACAGCAAACATTGAAAGGATGGAAGAAGCAGTGTTTGCACACTTGAGATTTAGCTATGCCAAGCTAAAGGATGATACAAGCAGGTCTTGTTTCCTCTTTTGTGCTTTATACCCTGAAAGTAACCAAATTGATAGCAATGAACTGATGGAATATTGGATGTGGGAAGGTTTATTGGGTTATGTTGGAGGAATAGCCGCAATGAAGAGGAAAGGGAAAATCATATTGAATGAATTAAAACATGCATGCTTATTAGAGGGTCTAACTCAAAACGTGGTGGAATTTGTCAGAATGCATGATTTAATACGAGATATGGCCATTACAATCATGAGAACGAATCCTCACTGCATATGTAAAGCAGGGATAGGGATGACAAAACATCAATGGATGGAGGAATGGGCGGAAGATGTTCAAAGGGTGTCACTAATGAGAAACGACTTGAAATGTATTCCCTTCAACTACAACCTCATGTGGCCTAAACTTACTTCCTTATTGTTGCAATTCAACTCGTTTTCTGAAAATATATCCCATGAAGTCTTCGAAAATATGCAATTTCTGAAAGTTCTGGACCTTTCCTACACTGGGATTGACTTCTTGCCTAATTCTGTCTCTAATTTAGAGAATCTATCTGCTTTGTTATTGAGCAACTGTTGGAATTTATCAACAGTTCCTTCTTTAGCAAAACTGAATAAGCTGATGGTCCTTGATCTCTCTTGCTCTCCAAGAATGAAAGAACTTCCAGATGGGATGCAATGGTTGGGAAACTTGAGGCGCTTAAATCTTTCCAAGACTGGAATTGAAATCTTCCCATTTGGATTGATGCCCAAATATACCCTTTTGGAAGACTTACTGATAGGTGGTTGTGGTATCTTGTGGGGATCAATGACAGTCAAAGCCATTAGTGGTGGAGCTTCCATTGAAGAAGTCATTTCCTCAAATATATCTTCTCTTGAACTAGACTTATGGAATGCAAATGTGTTTGATCAATATGCCAAATCTGGTCATTGGGTTCAGCTGGATAAGTTCAGGATAACAATTGGGCAGCCCCAAGCACAGTTTTGTGAAGAGAGAAGCTTAGCCTTTAGTGGAAGACTTGTTCTAAGAGGAGACCCAGTTTCTCTCCCACCAAACACATTGGAGCTACATCTGGATGACTCTGCTGATATTAAGAATCTGAGTATGTGCTTAGTGAATGTGACACAATTGAAATACTGTAAAATCAGGTGGTGTGATGACATAGAAAGCATAATTGACTCAGAGGAAGAGGAAAACACTTTACCCATGCTAGAAAGGATGGAACTTTTAGTTCTGGGAAACTTGAAGATGATATGTAGGGATGTAGTGAGACCTGGAACTCTTATGAGCTTGAAGATCATTACTGTGGAATATTGTCCAAAACTGAAGACTCTATTCTCAGGGCAGATTTTGCTTCAACTTAAGAATCTGGAAGAAATTACTGTTCGCAGTTGTACTGGTATGGAGTGCATAATGAAAGGAGAAGAGGGAGAAAATGATTCAGGAATTGAGTTTCCAAAGCTGAAGAGGGTGAAACTGAAGTTCATGCCCCTTTTGGAGAGTATATATGATGGAACCATTCTCTGCCCTTCTTTAAAAAGTCTTGAGGTAGCATCCTGTGAAGCTCTGAAGAAGCTTCCTCTTGATCTGTCAGCAACACCTGCTCTTGAAGAAATCAGAGCAACCAGAACATGGTGGAACTCATTAGAGTGGGATCAACCTGATTCTAAAAATGTCCTGCAACCTTACCTTGTGGAAATTAGATTGACAAGTACAAGTGACAGATAA 2919 0.4046 MDVGSIVSILNCLCSPNSLQQTLERQCRHLRKPRKNLNKLKELVEQLDARRSDLNTKLNQMWLEKGMNPREEVKLWMKSVDRVKSQVSTLMESNNGCSFNFVCSRIKLGGVVEEKISEVKELLDNGQFLDYLVAENLPKVGYTLPSPPLMECVTTMKSLTRILECLSLQRVKRIGVYGMGGVGKTTIMKEIHNRLLEGRDFDHVIWVSAPKEPSPVKLQKGIGEKLDLDLSMIDDDVTRAAKLFEALSRRKRYTLILDDLWEHFSLETVGIPIPTTENGCKLVITTRLLSVCRGMETDDDVEVKALQDDEAWDLLRSKVGPVLSNSAEVEMIAREVTKECGGLPLAIVTVGRALRNAADVSEWECALDELRASTANIERMEEAVFAHLRFSYAKLKDDTSRSCFLFCALYPESNQIDSNELMEYWMWEGLLGYVGGIAAMKRKGKIILNELKHACLLEGLTQNVVEFVRMHDLIRDMAITIMRTNPHCICKAGIGMTKHQWMEEWAEDVQRVSLMRNDLKCIPFNYNLMWPKLTSLLLQFNSFSENISHEVFENMQFLKVLDLSYTGIDFLPNSVSNLENLSALLLSNCWNLSTVPSLAKLNKLMVLDLSCSPRMKELPDGMQWLGNLRRLNLSKTGIEIFPFGLMPKYTLLEDLLIGGCGILWGSMTVKAISGGASIEEVISSNISSLELDLWNANVFDQYAKSGHWVQLDKFRITIGQPQAQFCEERSLAFSGRLVLRGDPVSLPPNTLELHLDDSADIKNLSMCLVNVTQLKYCKIRWCDDIESIIDSEEEENTLPMLERMELLVLGNLKMICRDVVRPGTLMSLKIITVEYCPKLKTLFSGQILLQLKNLEEITVRSCTGMECIMKGEEGENDSGIEFPKLKRVKLKFMPLLESIYDGTILCPSLKSLEVASCEALKKLPLDLSATPALEEIRATRTWWNSLEWDQPDSKNVLQPYLVEIRLTSTSDR 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1160 972 PRINTS Disease resistance protein signature 340 354 - -
Alju03g1160 972 PRINTS Disease resistance protein signature 173 188 - -
Alju03g1160 972 PRINTS Disease resistance protein signature 599 615 - -
Alju03g1160 972 PRINTS Disease resistance protein signature 247 261 - -
Alju03g1160 972 Pfam NB-ARC domain 159 393 IPR002182 GO:0043531
Alju03g1160 972 Gene3D Ribonuclease Inhibitor 843 947 IPR032675 -
Alju03g1160 972 Coils Coil 37 57 - -
Alju03g1160 972 FunFam Probable disease resistance protein At1g63360 392 480 - -
Alju03g1160 972 FunFam Probable disease resistance protein At1g61300 145 300 - -
Alju03g1160 972 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 28 928 - -
Alju03g1160 972 Gene3D Ribonuclease Inhibitor 483 718 IPR032675 -
Alju03g1160 972 Gene3D - 392 480 IPR036388 -
Alju03g1160 972 Gene3D - 140 304 IPR027417 -
Alju03g1160 972 FunFam Probable disease resistance protein At5g66910 305 391 - -
Alju03g1160 972 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 407 IPR027417 -
Alju03g1160 972 Gene3D - 305 391 IPR042197 -
Alju03g1160 972 Pfam Leucine rich repeat 531 589 IPR001611 GO:0005515
Alju03g1160 972 SMART AAA_5 170 307 IPR003593 GO:0016887
Alju03g1160 972 SUPERFAMILY L domain-like 469 929 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1160 Alju-ChrAlju03 39909720 39912638 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1160 171 663 WRKY Transcription Factor Family AT5G45050 22.182 4.61e-11 65.1