Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju03g1159 | ATGGCAGAGAAGAATCCCCTGGTTTTTATGGATATCTCTATTGATGGGGTGCCTGTTGGAAGCATGACTTTTGAGCTGTTCAAAAAAGTTGCCCCCTGTGCCGCAGAAAATTTTCGTGCGTTATGTACGGGAGAAAGGGGAATTGGGAAGAACTATGGTTTACCTCTACATTACAAAGGTTCTTTCTTCGTTGATATGTGGAAAGGCGGTTCCTATTTGAAGGGGGGTGACTTCTGTAATCCATTCGGGAGATGTGGGCAAAGTATTTATAATGGTGATATCCCAGATGAGAAACCTGGACTTAAATGTGATAAAAAAGGACTTCTGGCCATGAACATGTTTGATTGGTATAGCCTTGGTTCTCACTTTGTGATAACATTGAAACCCGATGAAGAACTTGATAGGTTTCATATTGTTTTTGGAAAGATTGTCAAGGGATTGAAGACGTTGGATGCAATTAAAAAAGCGCATGCAGAGAACAGAGTTCAAGTGAGTGAATGTGGTGAATGCAATGAAGATGGGAGCAAAAGTTACGGTAGGCCTCAGAGAAGTAAACCCAAGAAGAGAGCCAAGATGTGCTAG | 582 | 0.4175 | MAEKNPLVFMDISIDGVPVGSMTFELFKKVAPCAAENFRALCTGERGIGKNYGLPLHYKGSFFVDMWKGGSYLKGGDFCNPFGRCGQSIYNGDIPDEKPGLKCDKKGLLAMNMFDWYSLGSHFVITLKPDEELDRFHIVFGKIVKGLKTLDAIKKAHAENRVQVSECGECNEDGSKSYGRPQRSKPKKRAKMC | 193 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju03g1159 | 193 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 135 | 150 | IPR002130 | GO:0000413|GO:0003755 | |
| Alju03g1159 | 193 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 122 | 134 | IPR002130 | GO:0000413|GO:0003755 | |
| Alju03g1159 | 193 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 26 | 41 | IPR002130 | GO:0000413|GO:0003755 | |
| Alju03g1159 | 193 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 8 | 169 | - | - | |
| Alju03g1159 | 193 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 9 | 193 | IPR002130 | GO:0000413|GO:0003755 | |
| Alju03g1159 | 193 | MobiDBLite | consensus disorder prediction | 169 | 193 | - | - | |
| Alju03g1159 | 193 | SUPERFAMILY | Cyclophilin-like | 4 | 164 | IPR029000 | - | |
| Alju03g1159 | 193 | PIRSF | Peptidylpro_ismrse | 1 | 176 | IPR024936 | GO:0003755 | |
| Alju03g1159 | 193 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 10 | 167 | IPR002130 | GO:0000413|GO:0003755 | |
| Alju03g1159 | 193 | Gene3D | - | 1 | 170 | IPR029000 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju03g1159 | Alju-ChrAlju03 | 39891446 | 39892940 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju03g1159 | 20 | 154 | U-box Gene Family | AT5G67530 | 32.353 | 1.82e-08 | 51.6 |