Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju03g1154 | ATGACTTTTGAGTTATTCCATGACTCAGCCCCCTTTACTGCAGAAAATTTTCGTGGCTTATGTACAGGAGAAAAGGGATTCAGTCCAAAAGCTATGCGTCCTCTGTGGTTCAGTGGCCGTTTCTTTTATCTTAGGAAAGGTTGTTCCTACGTGAAGGGAGGTGTATTTTGCTGTGAAACTGGTGAAGGTGGAGAAAGCTTAATGGGTTCACACTTACCAGCGGAATCAAACAATCTTAAGCATGATAGAGCAGGACTTCTGTCCACGCGCAGAGGAGATGGTTCTAATTTTTTGGTCACACTAGAAGCTGACCAAAGCCTCGACAGTTCGCATGTGGTGTTTGGGAAGGTTGTTGAAGGATTTGGGACACTGTTGCTTATGAAAGACTATGGTATAGAGGGAGCTAAAATTGTCGACGCTGGTGAATTATATAATGCTGAGCTTCCTAAACATGTGGTTGTGACGCGTTATTTGTCTCATGCGGTTGACAAAGACCATGGTTCAGTGAGCAGACCCGTAATTCATAATACATCATCTCAAAGTGCAAGTAAAGACACTGGTCGGAGACCTGTGGGAGGAAAGATGAAAAAGGGAAAGATCTCTGTTAGGGAACAACGTCCTCTTCTGGTGTATTTCAGAAAGAAACGTATCGTTCATGGGTAA | 663 | 0.4359 | MTFELFHDSAPFTAENFRGLCTGEKGFSPKAMRPLWFSGRFFYLRKGCSYVKGGVFCCETGEGGESLMGSHLPAESNNLKHDRAGLLSTRRGDGSNFLVTLEADQSLDSSHVVFGKVVEGFGTLLLMKDYGIEGAKIVDAGELYNAELPKHVVVTRYLSHAVDKDHGSVSRPVIHNTSSQSASKDTGRRPVGGKMKKGKISVREQRPLLVYFRKKRIVHG | 220 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju03g1154 | 220 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 109 | 124 | IPR002130 | GO:0000413|GO:0003755 | |
| Alju03g1154 | 220 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 96 | 108 | IPR002130 | GO:0000413|GO:0003755 | |
| Alju03g1154 | 220 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 5 | 20 | IPR002130 | GO:0000413|GO:0003755 | |
| Alju03g1154 | 220 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 132 | - | - | |
| Alju03g1154 | 220 | Gene3D | - | 1 | 156 | IPR029000 | - | |
| Alju03g1154 | 220 | SUPERFAMILY | Cyclophilin-like | 1 | 143 | IPR029000 | - | |
| Alju03g1154 | 220 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 1 | 129 | IPR002130 | GO:0000413|GO:0003755 | |
| Alju03g1154 | 220 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 1 | 160 | IPR002130 | GO:0000413|GO:0003755 | |
| Alju03g1154 | 220 | MobiDBLite | consensus disorder prediction | 167 | 198 | - | - | |
| Alju03g1154 | 220 | MobiDBLite | consensus disorder prediction | 171 | 186 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju03g1154 | Alju-ChrAlju03 | 39734972 | 39737233 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju03g1154 | 1 | 145 | U-box Gene Family | AT5G67530 | 31.847 | 1.95e-09 | 55.1 |