Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1138 ATGGCCACTGTTGGGTCTTCTTCTTCTTCTTCGTCAAAGGTCTGCTACAATCCCGAGTGTAAAGAATTGAAGTCAGACAGACCTAAGAAGGGTTGGAGACTCCGTACTGGAGACTTCGCCGAGCTCTGTGATCGATGCGGTTCTGCTTTTGAGGAAGGAAGGTTCTGTGAGACTTATCATGCGAAAGCTTCTGGTTGGAGGAATTGTGAGACATGTGGGAAGGAAATTCATTGCGGGTGTATTGTTTCATGTATTGCCTTTATGTTGTTGGATCCTGGAGGCATTGAATGCAGTCCATGCGCCAGAAAGAATCTTATTTTGTCATCCAGTCTACCTTGGCCACCCTCTTTTTCTCTTCAAAGTCGTTTTAGAGACCCGACCTTAAAAAATTGGAGTCAGTTGGCTGGATCAGGTCCCGTGCCATGGAAGCAAGCACCCAGTCTATTCAATACAACTTCATCTGACCGGCACCCAGATATGCCACCAGTAGTTGAAATATCTAGTGTTGACAATATTTATGGAAATGAAAGGATATCTGCCTCATCTCTGGAAAAGAAAAGTGACGATCTTTCTGGAATACCAGCTAATTGGAATGTAAAGATTGGTGCACGGGAAATGATGTTTATAAATGGAATGCGTAATGATGAAAAGGCTAGTTCATGCTTGAATATGTGCCAGCAACCTTCTCTAAAGGAGGATTCATCAACCCAACCATTTGGTTTAACTGTGCCATATGCTCATCAAAATGAAAGAAATGGTCAAGTTGGGGTAACTGGAAGTCATCCGCAACAAACTCCTCCACCTCCTCACGGAAAGCAATTTAGTGGCCCAATACATGTTGCACTTGATTCATCAGGTGAATCACAGGTGCGAAATGGACGGCCCAGAGCAGATGCCCGAGGAAGGAACCAGTTACTGCCCAGGTACTGGCCTAGGTGCACAGATCAGGAGCTACATCAAATATCTCTCGACTCTAATTCTGTTATAACTCCATTGTTCCAAAAAACGTTGAGTGCTAGTGATGCTGGGCGAATTGGGCGTCTAGTGCTACCAAAAAAATGTGCTGAGGCTTACTTTCCACCAATTTCTCAGCCTGAAGGGTTGCCACTTAAAATCCTTGATGCAAAAGGCAAGGAATGGATATTTCAATTTCGCTTTTGGCCCAACAATAACAGTAGAATGTATGTTTTAGAAGGTGTAACTCCGTGCATCCAATCCATGCAATTGCAAGCTGGTGACACAGTAACATTTAGTCGGTTGGAGCCAGAGGGGAGGTTGGTTATGGGATTTCGAAAGGCTTCAAGTGCTACCCAATCTGATCAGGACAATGAAACAAACAATACTGGAAATGGATGTTCTACACATGGTGAAGTTGAATTGGATCCTAGTTCATGGTCTAAAGTTGACAAATCAGGATATATAGCAAAAGAAGCACTGGGGAGCAAATCTTCCATTTCTAGGAAGAGAAAGAGTGGTGCTTTGGGTTCCAAGAGCAAGCGACTAAGAATTGAAAATGAGGATCTAATAGAGTTGAATATTACATGGGAAGAAGCTCAAGGCCTGCTCCGCCCCCCTCCTAACCATGTTCCCAGCATTGTGGTGATTGAAGGTTTTGAATTTGAGGAGTATGAGGATGCTCCAGTACTGGGGAAACCAACAATTTTCGCTACTGACAGTGTTGGTGAAAAGATCCAGTGGGCTCAATGTGAAGATTGTCAAAAATGGCGCAAATTGCCAGCTAATGCTCTTCTAACATCAAGATGGACATGTTCAGATAATCCATGGGACCCAGAAAGATCATGTTCGGCTGCACAGGAGTTGACATCAGAACAGCTTGAAGATTTGTTTCCCCCTTGTCATTCAGTTGTATCCAAGAAAATGAAGACTGCCAAGCAGGATCCCGATAACGTCGAAGCTTTGGAAGGACTTGACACTCTTGCTAACCTTGCTATCTTGGGAGAAGGGGAGGCTCTCCCATCGTCTGCCCAGGCCACAACAAAACACCCTCGGCATAGACCTGGCTGCTCTTGCATTGTTTGCATTCAGCCTCCTAGTGGGAAGGGGCCCAAGCATAAGCAGACTTGCACATGTAATGTTTGCTTGACAGTGAAGCGCCGTTTCCGTACCTTGATGTTACGGCGTGAGAAGAAACAATCAGAGAGAGAAGCAGAGACAACACGTAAAAAGCAGCAGCCCCAGCCACCTCAGCCGCCACCACCTATGTCAGAGATATTGATTGATGATGATTCCCTGCCTTGCAGTAACACAGGAGATAGTAGTAGTCCTAATCAGAACAGGGAGGGCAATGAAGGTTCCGATGAAGACCCTAACAAGACAAAGTCATCCGCCTCGCCATTTAAGGGCCAGATTGATCTCAATATTCAGCCAGAGCGAGAGGAAGAGTTGTCTCCCAGTTCAGATTCCGGAAGTATGATAAAGTTGCTCCATAATGCCACCGAGAGGCATCTGAGGCAGCAGAGTATGGTGAACTCTTTTGCTGGAGATGCTTCAGGTGGACTGTCACAGCAAGTCGGAGATGACGTGAGGGAAGATAAACTTTGCAATGGTGTTGCCCTTGGCAGCAGCAATCGTAATGCTGACAAGGAACATGCCCAAACATTGTCTATGAACGTGTGA 2637 0.4543 MATVGSSSSSSSKVCYNPECKELKSDRPKKGWRLRTGDFAELCDRCGSAFEEGRFCETYHAKASGWRNCETCGKEIHCGCIVSCIAFMLLDPGGIECSPCARKNLILSSSLPWPPSFSLQSRFRDPTLKNWSQLAGSGPVPWKQAPSLFNTTSSDRHPDMPPVVEISSVDNIYGNERISASSLEKKSDDLSGIPANWNVKIGAREMMFINGMRNDEKASSCLNMCQQPSLKEDSSTQPFGLTVPYAHQNERNGQVGVTGSHPQQTPPPPHGKQFSGPIHVALDSSGESQVRNGRPRADARGRNQLLPRYWPRCTDQELHQISLDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFRKASSATQSDQDNETNNTGNGCSTHGEVELDPSSWSKVDKSGYIAKEALGSKSSISRKRKSGALGSKSKRLRIENEDLIELNITWEEAQGLLRPPPNHVPSIVVIEGFEFEEYEDAPVLGKPTIFATDSVGEKIQWAQCEDCQKWRKLPANALLTSRWTCSDNPWDPERSCSAAQELTSEQLEDLFPPCHSVVSKKMKTAKQDPDNVEALEGLDTLANLAILGEGEALPSSAQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFRTLMLRREKKQSEREAETTRKKQQPQPPQPPPPMSEILIDDDSLPCSNTGDSSSPNQNREGNEGSDEDPNKTKSSASPFKGQIDLNIQPEREEELSPSSDSGSMIKLLHNATERHLRQQSMVNSFAGDASGGLSQQVGDDVREDKLCNGVALGSSNRNADKEHAQTLSMNV 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1138 878 MobiDBLite consensus disorder prediction 712 809 - -
Alju03g1138 878 ProSiteProfiles B3 DNA-binding domain profile. 333 434 IPR003340 GO:0003677
Alju03g1138 878 Gene3D - 311 438 IPR015300 -
Alju03g1138 878 Gene3D - 555 611 - -
Alju03g1138 878 CDD B3_DNA 331 432 IPR003340 GO:0003677
Alju03g1138 878 MobiDBLite consensus disorder prediction 431 464 - -
Alju03g1138 878 MobiDBLite consensus disorder prediction 752 767 - -
Alju03g1138 878 SMART B3_2 333 434 IPR003340 GO:0003677
Alju03g1138 878 MobiDBLite consensus disorder prediction 713 728 - -
Alju03g1138 878 MobiDBLite consensus disorder prediction 432 460 - -
Alju03g1138 878 MobiDBLite consensus disorder prediction 859 878 - -
Alju03g1138 878 Pfam CW-type Zinc Finger 565 606 IPR011124 GO:0008270
Alju03g1138 878 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 12 836 - -
Alju03g1138 878 ProSiteProfiles Zinc finger CW-type profile. 560 609 IPR011124 GO:0008270
Alju03g1138 878 FunFam B3 domain-containing transcription repressor VAL1 311 438 - -
Alju03g1138 878 MobiDBLite consensus disorder prediction 252 279 - -
Alju03g1138 878 SUPERFAMILY DNA-binding pseudobarrel domain 330 433 IPR015300 -
Alju03g1138 878 Pfam B3 DNA binding domain 333 432 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1138 Alju-ChrAlju03 39450103 39461315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1138 11 717 B3 DNA Binding Superfamily AT4G32010 46.080 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Alju03g1138 B3 9.6e-16 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g1138 03 39450103 39461315 Alju03g1138 03 39450103 39461315 ECH