Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1113 ATGGTATTCAACAAGCGAGAAATCTATCAAACGGCGCCTGAATCTCAGGGTCAGGGTCATGGCAGCCTTCAGTACAGCAAAGCCAGGCCCTTTCTTGGCCGCCAAGTCAAAAAAGGGCAGATCACAAAACAAAACAGTTGTTCACGCCTCCACCTTCCCACCGTCATTCCCGATGTTTCTCTCTCCCACCTTCCCGGATTCTCTCTGATCCCACTCTCTCTCTCTCTCTCTATTTCTGCGGCTCTCCCACGCCAACCTCCCCTAAACCCTCCTCTCTCTGTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCAACATTTTCTCCTCCTTTTCCCTCTGTTTCCTCTCCCGGATTATCGGACACCGATCTCCTACTTCATATCACCATTTCACTCCACAATGCCGAATTTCACTTTCTATCAACGAGTTTCTAGAGCTTTCCATGAAACCTCCTCCCTTTCCAAGCTTCTCGTGCTTTTCACCGTCAGTGGTGGGACGGGGGCCCTTGTGGCTTATGCAGAAGCAGATCGAAGCAATAATGGAGCATTTATTGGTTCATCAGAAACAGTTTCGGAAAAGAGAAAGGTGGTGGTGCTCGGAACTGGCTGGGCAGGCACAAGTTTCTTGAGGAACCTAAACAACCCCAGATATGAGGTTATGGTGGTCTCGCCCCGCAACTATTTTGCTTTCACTCCTCTTTTGCCTAGCGTCACCAGCGGTACTGTCGAAGCGCGCAGCATCGTTGAACCTGTTCGTAATATTTTTCGGAAGAAAAGAATGGACATTGAATATGGTGAAGCCGAGTGTCTCAAGGTTGATGCAGAAAATAGGAAAATTTACTGTCGGTCCAGTTTAAACAACAATAAGAACGGGAAAGAAGAATTTGTCGTGGACTATGATTACCTAATCATAGCCGTGGGGGCTAATGTCAACACATTCAACACTCCTGGAGTTGAGGAGCATTGCCATTTCTTAAAGGAAGTAGAAGATGCCCAGAAGATTAGGAGAACTGTCATTGATTGCTTTGAGAGAGCAAGCCTGCCAACTGTAAGTGATGAAGAGAAGAAGAGGATTCTTCATTTTGCAATAGTTGGAGGTGGCCCAACCGGGGTGGAGTTTGCAGCCTCCCTTCATGACTTTGTCAATGAGGATTTGGGCAAGTTATATCCTCGGGTAAAAAATTTAGTTAAGATCACGCTTCTGGAGGCTGGAGATCACATTCTGAGCATGTTTGACAAGAGAATTACTGCATTTGCTGAAGACAAGTTCAATAGAGATGGCATTGATGTGAAAACAGGATCCATGGTGGTGAAGGTGTCGGATAAAGAAATTTCTACCAAGGAAATGAAAAATGGAGGAGAGATTACAACAATTCCATATGGAATGGCTGTGTGGTCAACTGGTATAGGCACTCGTCCATTTATCAAAGATTTCATGAAGCAAATTAACCAGGCTAACAGGCGTGCGTTGGCTACTGATGAATGGTTGAGAGTTGAAGGGTGTGACAATGTTTATGCTCTTGGTGATTGTGCTACCATAAACCAGCGAAAAGTCATGGGAGATATTGCCGCGATTTTTAAGAAAGCAGATAAAGACAACTCAGGAACGCTTACAGTGAAAGAATTTCAAGAGGTGATTGACGATATCTGTGAAAGGTACCCTCAGGTGGAGCTGTATCTGAAAAGCAAGCAGATGCGCAGCATTGTTGATCTGTTGAAGGAAGCTAAGGGAGATGATAAAAAGGAATCAACTGAACTGAGCATCGAAGACTTCAAAGCGGCATTGTCCAATGTGGATTCCCAGATGAAATTTCTTCCTGCTACAGCACAGGTTGCATCTCAGCAGGGAGCATACCTGGCCAAGTGTTTTAACCGGATGGAGGAGTGTGAAAAGAATCCAGAGGGTCCTCTTAGGTTCCGGGGAGAAGGTCGCCACCGCTTCAAACCCTTTAGGTACAAGCATTTGGGACAGTTTGCTCCACTTGGAGGAGAGCAGACAGCAGCACAGCTTCCTGGGGATTGGGTATCAATTGGCCACAGTTCCCAATGGTTATGGTATTCTGTCTATGCAAGCAAGCAAGTGAGCTGGCGTACAAGGGCCTTAGTGGTGTCGGACTGGTTGAGACGCTTTGTCTTCGGTAGGGACTCGAGTCAAATCTGA 2157 0.4636 MVFNKREIYQTAPESQGQGHGSLQYSKARPFLGRQVKKGQITKQNSCSRLHLPTVIPDVSLSHLPGFSLIPLSLSLSISAALPRQPPLNPPLSVALSLSLSLSQHFLLLFPLFPLPDYRTPISYFISPFHSTMPNFTFYQRVSRAFHETSSLSKLLVLFTVSGGTGALVAYAEADRSNNGAFIGSSETVSEKRKVVVLGTGWAGTSFLRNLNNPRYEVMVVSPRNYFAFTPLLPSVTSGTVEARSIVEPVRNIFRKKRMDIEYGEAECLKVDAENRKIYCRSSLNNNKNGKEEFVVDYDYLIIAVGANVNTFNTPGVEEHCHFLKEVEDAQKIRRTVIDCFERASLPTVSDEEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLGKLYPRVKNLVKITLLEAGDHILSMFDKRITAFAEDKFNRDGIDVKTGSMVVKVSDKEISTKEMKNGGEITTIPYGMAVWSTGIGTRPFIKDFMKQINQANRRALATDEWLRVEGCDNVYALGDCATINQRKVMGDIAAIFKKADKDNSGTLTVKEFQEVIDDICERYPQVELYLKSKQMRSIVDLLKEAKGDDKKESTELSIEDFKAALSNVDSQMKFLPATAQVASQQGAYLAKCFNRMEECEKNPEGPLRFRGEGRHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWLRRFVFGRDSSQI 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1113 718 PANTHER NADH DEHYDROGENASE 189 718 IPR045024 GO:0003954|GO:0006116
Alju03g1113 718 ProSiteProfiles EF-hand calcium-binding domain profile. 516 551 IPR002048 GO:0005509
Alju03g1113 718 MobiDBLite consensus disorder prediction 9 23 - -
Alju03g1113 718 SUPERFAMILY FAD/NAD(P)-binding domain 353 513 IPR036188 -
Alju03g1113 718 SUPERFAMILY FAD/NAD(P)-binding domain 192 411 IPR036188 -
Alju03g1113 718 SUPERFAMILY EF-hand 474 605 IPR011992 -
Alju03g1113 718 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 562 717 - -
Alju03g1113 718 ProSitePatterns EF-hand calcium-binding domain. 529 541 IPR018247 -
Alju03g1113 718 MobiDBLite consensus disorder prediction 1 24 - -
Alju03g1113 718 Pfam Pyridine nucleotide-disulphide oxidoreductase 194 515 IPR023753 GO:0016491
Alju03g1113 718 Gene3D - 185 550 - -
Alju03g1113 718 Gene3D - 560 717 - -
Alju03g1113 718 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 184 545 - -
Alju03g1113 718 PRINTS FAD-dependent pyridine nucleotide reductase signature 158 177 - -
Alju03g1113 718 PRINTS FAD-dependent pyridine nucleotide reductase signature 359 377 - -
Alju03g1113 718 PRINTS FAD-dependent pyridine nucleotide reductase signature 298 316 - -
Alju03g1113 718 SMART efh_1 520 548 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1113 Alju-ChrAlju03 39164804 39169929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1113 133 718 Chloroplast and Mitochondria Gene Families AT4G21490 73.514 0.0 888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g1113 03 39164804 39169929 Alju03g1113 03 39164804 39169929 CCT