Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1108 ATGGCAGAGGAGTTTGAAGCTGCTGGGATTTATGGTGGGAATTGGTGGATTAATAATATGAATACTTGTTCTTTATCATCATCATCACTCTGTTCTATTGCTGCCAATAACGATTATGGAGGCAGCAACTTTAGTTGTACTAATTGGCAAACTCATCACAATCTCATGGATCTCAAGTCGCCGTTATTGGTTTCTCATCATGATTCTCTGGATTTTCTCGTTCAAGATGAGCAGAAGCAAAATCATCAGAATGAATCATCACCATCATCAGCTTCTGGAAATAATGGAAACATATTGATTGATTCCTCCTTGGGCTTTCCCCTCCCTCCTTCATCAACTTCTTCTTTACTGGGGAGACCAGAAAGCAATTTCCAATGTGTGATTGAAGAAGAAGGTGGTGGGGGTGTAGATTCTTGCAATAATTCAGAAATGAAAAGAAGCAAGAACCAAGAATTTGGCATAGATCTTGAACAGAATCTGAGTTATGGGATGTATGATGATGATGAAGAACACAATATTGGTCTTCATTTTCAGCAGCCAGAGGATCACTCGCTTTTCACCAACCCTTCCGTGGCTTATTGTAGCTTTGATTCAACCAATCAGGTTACGCCACCAAGTTGGTCCAAAGCCTCTGCTGGTCACTTTTTGAAGCCTCATTCAATACCAAAGCAGCACCAGCTCGGTGGTGGATTCCACTTTTTGAAGCCTTATTCAGCTGATCATGTTTTTGCTTCTTCATCCCCACAATCTCAAACTTTTCAACACAAACCCAGTTGTTTACCCCTCTCAACCAAGCACAAAAGAGAAGAAACTCCTGTTAGTAGTGAAGAACAACCAGCTGAATTATTCAAAAGGCCCAGAATTGAAACTCCTTCACCACTACCAACTTTTAAGGTTCGGAAAGAAAAGTTAGGGGACCGAATCACAGCTCTTCAGCAATTAGTTTCACCTTTTGGAAAGACGGACACAGCATCTGTTCTTCACGAAGCCATCGAGTACATCAAGTATCTTCATGATCAAGTCAGCGTTTTGAGTGCTCCATATTTGAACAATAACGCACCTGCTGCTCATCAAAACTATCAGGGTTGTGAAGAGAAAGAATGGAAAGATTTGACAAGTCAAGGGTTGTGTTTGGCACCGATATCGAGTACATTCTCACTTGCTAACTATGAGATTATGGCTTCTGAGTTATGGACTCATCAGGCTTATGGAGGAACTGATCTCTTGAGGTAG 1233 0.4128 MAEEFEAAGIYGGNWWINNMNTCSLSSSSLCSIAANNDYGGSNFSCTNWQTHHNLMDLKSPLLVSHHDSLDFLVQDEQKQNHQNESSPSSASGNNGNILIDSSLGFPLPPSSTSSLLGRPESNFQCVIEEEGGGGVDSCNNSEMKRSKNQEFGIDLEQNLSYGMYDDDEEHNIGLHFQQPEDHSLFTNPSVAYCSFDSTNQVTPPSWSKASAGHFLKPHSIPKQHQLGGGFHFLKPYSADHVFASSSPQSQTFQHKPSCLPLSTKHKREETPVSSEEQPAELFKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKYLHDQVSVLSAPYLNNNAPAAHQNYQGCEEKEWKDLTSQGLCLAPISSTFSLANYEIMASELWTHQAYGGTDLLR 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1108 410 CDD bHLH_AtbHLH_like 294 345 IPR045239 -
Alju03g1108 410 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 298 351 IPR036638 GO:0046983
Alju03g1108 410 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 87 386 - -
Alju03g1108 410 FunFam Transcription factor bHLH123 family 298 360 - -
Alju03g1108 410 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 288 337 IPR011598 GO:0046983
Alju03g1108 410 Gene3D - 298 355 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1108 Alju-ChrAlju03 39102043 39104571 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1108 226 398 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21340 45.833 5.53e-40 142