Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1101 ATGGGATTCAGACTTAGTACTCTTAGTTTGATTAATGCTCTCCTCGTAATTTCCAGCTTCTGCCTGGCTTTAGTCTCTGCCAACGATACGATTACAGCAGGCCAAATCATCAGAGATTCTGAGATACTGAGCTCAAACAGTAATGATTTCATACTAGGATTCTTCAGCCCTCCAAATTCAACACAGCGCTATGTGGGAATCTGGTATCTCTCTCATGACAACCTCGTCTGGGTGGCTAACAGAGACAAACCCATCAACGATTCTTCTGGGGTCCTCACAGTTTCCCAAGACGGCAACCTTGTGATATTAGATGGACAAAAACATGTACTTTGGTCATCAAATGTGTCATACAATGGAACAAACACGACAGCCCAGATTCAAGATTCTGGGAATCTTGTCCTCCAAGTGTTTGATGAAAATACTGGGAAGAAATTAATATGGCAGAGCTTTGAACATCCTGCTGATGCAGCAGTACCAAACATGAGGATCAGTGCCAACAGATTCACAGGTAAGAAGATAGAGTTTGTGTCATGGAAAAGCTTCTCTGATCCATCACCTGGTTACTTCTCTGCGAGTCTAGAACGTCTTGTTCTTCCAGAAGTGTTCTTGTGGGTCAATAGAACTCGCCCATATTGGCGAACTGGTCCGTGGAATGGAAGGATCTTCGTTGGAGCACCACTGATGTCAACTGGGTATCTATATGGATGGTCTCTGGGAAATCAAGATGATGGAACTGTTTATGTAACTTACAGTTTTCTTGACAAAGCTGCTTCTGGAATTCTTTCATTGAACCCACAAGGCAAGCTTAGATTGGTAAGGTTTCACAACAAGAAGAAATATCTGGATGTGCTTTTAGATCTATCAGACTGTGATCACTATGGCATGTGTGGGGATTTTGGGAGCTGTAATGATCAGAGTACACCAATGTGTAGCTGCTTAAATGGGTTTGAACCAAAGGTTACAGAGGAATGGAATAGGCAGAATTGGACAAGTGGGTGTGTGAGAAAGTCACCATTGATGTGTGAGAGCTTGAAGAATGGAAGTAGTAAAGCTGGGGAAGAAGAAGATGGGTTTCTGAGATTTCAGAATATGAAAGTGCCTGATTTTGCAGAGAGGTCAGGTGTTGACACAGAAGCTCAATGCAGAACTGAGTGCTTCAATAATTGCTCCTGTTTGGCATATGCATTTGATGCTGGCACTGGATGCATGTATTGGACTAAACCCTTGATTGATGTGCAAGAATTCTCTAATGGAGGAACTGATCTCTATATTCGTATGGCTCATTCAGAACTTGGAAAAGGTTCTGGTAAAAGCACAAATAAGAGAGAAATCATCGTAGTGACAGTATCGGTTGGAACAGTTATCTTAGTTGCATTTGTATGCCTATTAGTCATCTATAACTATCGCTCTCGGAGCAAAATAGCGCATAAGCAAAGAGAAAATCAGAGTCAAAGAGTGAATGACACCAACAAACAAGTTAAGCTAGATGAGCTTCCGATATTTGATTTTGAAGAGGTTGCATCTGCTACAAATAGCTTTCACTTAGCTAACATGCTGGGGAAGGGTGGTTTTGGCCCAGTTTACAAGGGGACATTGCAAGATGGTCAGGAAATTGCAGTAAAAAGGCTGTCCAGAGCATCCGGACAAGGGCAAGAAGAATTCATGAATGAGGTGTTAGTCATCTCGAAGCTTCAACATCGCAATCTTGTAAAACTTCTTGGTTGCTGCCTTGAAGGAGATGAAAAGATGTTAATATACGAATTTATGCCAAATAAAAGCTTGGATGCATTTCTCTTTGATCCAATCCAAAGAAAATGTTTGGATTGGAGAAAAAGATTTAACATTATTGAAGGAATAGCTCGAGGTTTGCTTTATCTTCATAGAGATTCTAGACTAAAAATCATACACAGAGATTTGAAACCAAGTAATATCTTGTTGGATGGGGAGATGAATCCAAAAATATCAGATTTTGGTCTAGCTAGAATTTTCGGAGCAAGCGAAGATATGGTTAATACTAAAAGAGTCGTTGGAACATATGGTTACATGTCTCCCGAATATGCAATGGAGGGTTTGTTTTCTGAAAAATCTGATATCTATAGTTTTGGAGTTTTAGTATTGGAGATTGTTAACGGAAGAAGAAACAGTAGCTACCACACCGATGAAGAGTCTCTTAGCCTTATAGGACTTGCATGGAGGCTATGGAATGAAGAGAAAATTATATCTTTAGTAGATCCAGACATATGGGATTCATGCAATGGGAGCCAAATAATGAAGTGCATACACATAGGGCTTCTATGTGTGCAAGAAGCAGCGAAAGAAAGGCCAAGCATGCCCAATGTGGTTATGATGCTTATAAGTGAGAATGTTCATCTTCCTCCTCCAAAGCAAGTAGCTTTTGTGCATAAGCATTGGGTTTCATGTTCAGAGTCCTCTAATTCTAAGGAACGTCAAATTGATTCCCATAATAATGTAACTCTTACTGATATTCAAGGTAGATAA 2499 0.4034 MGFRLSTLSLINALLVISSFCLALVSANDTITAGQIIRDSEILSSNSNDFILGFFSPPNSTQRYVGIWYLSHDNLVWVANRDKPINDSSGVLTVSQDGNLVILDGQKHVLWSSNVSYNGTNTTAQIQDSGNLVLQVFDENTGKKLIWQSFEHPADAAVPNMRISANRFTGKKIEFVSWKSFSDPSPGYFSASLERLVLPEVFLWVNRTRPYWRTGPWNGRIFVGAPLMSTGYLYGWSLGNQDDGTVYVTYSFLDKAASGILSLNPQGKLRLVRFHNKKKYLDVLLDLSDCDHYGMCGDFGSCNDQSTPMCSCLNGFEPKVTEEWNRQNWTSGCVRKSPLMCESLKNGSSKAGEEEDGFLRFQNMKVPDFAERSGVDTEAQCRTECFNNCSCLAYAFDAGTGCMYWTKPLIDVQEFSNGGTDLYIRMAHSELGKGSGKSTNKREIIVVTVSVGTVILVAFVCLLVIYNYRSRSKIAHKQRENQSQRVNDTNKQVKLDELPIFDFEEVASATNSFHLANMLGKGGFGPVYKGTLQDGQEIAVKRLSRASGQGQEEFMNEVLVISKLQHRNLVKLLGCCLEGDEKMLIYEFMPNKSLDAFLFDPIQRKCLDWRKRFNIIEGIARGLLYLHRDSRLKIIHRDLKPSNILLDGEMNPKISDFGLARIFGASEDMVNTKRVVGTYGYMSPEYAMEGLFSEKSDIYSFGVLVLEIVNGRRNSSYHTDEESLSLIGLAWRLWNEEKIISLVDPDIWDSCNGSQIMKCIHIGLLCVQEAAKERPSMPNVVMMLISENVHLPPPKQVAFVHKHWVSCSESSNSKERQIDSHNNVTLTDIQGR 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1101 832 Gene3D - 23 150 IPR036426 -
Alju03g1101 832 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 184 IPR036426 -
Alju03g1101 832 Gene3D Transferase(Phosphotransferase) domain 1 589 791 - -
Alju03g1101 832 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 776 - -
Alju03g1101 832 SUPERFAMILY Protein kinase-like (PK-like) 497 803 IPR011009 -
Alju03g1101 832 Pfam PAN-like domain 353 412 IPR003609 -
Alju03g1101 832 Pfam Protein tyrosine and serine/threonine kinase 514 782 IPR001245 GO:0004672|GO:0006468
Alju03g1101 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Alju03g1101 832 PIRSF SRK 2 832 IPR024171 GO:0004674
Alju03g1101 832 CDD PAN_AP_plant 350 427 - -
Alju03g1101 832 CDD STKc_IRAK 519 784 - -
Alju03g1101 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 476 588 - -
Alju03g1101 832 ProSiteProfiles Protein kinase domain profile. 513 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1101 832 SMART ntp_6 353 426 IPR003609 -
Alju03g1101 832 SMART blect_4 34 153 IPR001480 -
Alju03g1101 832 Gene3D Phosphorylase Kinase; domain 1 486 588 - -
Alju03g1101 832 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Alju03g1101 832 ProSiteProfiles PAN/Apple domain profile. 341 427 IPR003609 -
Alju03g1101 832 CDD B_lectin 35 153 IPR001480 -
Alju03g1101 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 589 792 - -
Alju03g1101 832 Pfam S-locus glycoprotein domain 212 319 IPR000858 GO:0048544
Alju03g1101 832 Pfam D-mannose binding lectin 75 179 IPR001480 -
Alju03g1101 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 150 - -
Alju03g1101 832 SMART serkin_6 513 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1101 Alju-ChrAlju03 39015751 39018958 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1101 471 799 Receptor kinase-like Gene Family AT4G11530 56.364 2.01e-126 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju03g1101 PK_Tyr_Ser-Thr 2.2e-47 CL0016