Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1097 ATGACTACGCTCCACCCGGCCGTGGAGTACGACGCTGACTCCGTCGCTTCCTCCCCTCGCTCCGACCATTTTCATGAACCCTTGCCTCGTGTCCGCTTCATGTGCAGTTTCGGCGGCAGGATATTACCCCGTCCCCACGATAACCAACTCCGATACGTCGGTGGCGACACCCGAATCGTCGCACTCCATCGCTCAATCTCCTTCTCCGCTCTCCTCCTCAGGCTTTCTAAGCTCTCAGGCACTACCAATATAACAGTGAAGTACCAGCTTCCCAATGAGGATCTGGATGCTTTGATTTCCGTTACGACGGATGAGGATGTGGAGAACATGATGGAGGAGTACGAGCGGGTCGCACAGAATCAAAACCCGAGGTCGGCTCGGCTCCGGCTATTTCTCTTCGTTAAGGAAGAAGATTCTAGAACCAACAGTATCAACTCCCTACTGGACGGCTCAGCCAATCGCGAGAGTTGGTTTGTCGATGCCCTCAACAGCGGCGTGGGTCGGCTCGAGCGAGGCCCTTCCGAGGCGTCTTCCATGGTTTCTGAAGTGCCTGATTATCTCTTCGGGTTGGAAAACTCCGACGAGGTCCAAACCCGAGAACCTAGGTTGAAATTCCGACCCGTTATCAACGACAATGTCTCCTGTTCGGATCCTGGCTCGCCGGCTCCGGTTGTTTCGTCTCCGTTTTGCTCCACCTCATCGGCAGCAAATGTGCCGTCCATGCCGAACCTCCCGCCGGTTAAAACCAAACCAGATAATCCGGTTCCTGTCATAGAATCGAAAGAAAATCACATTGATGGTTTTCAAACCGGAAATCCAGGTGGCCAGATACCTCACTACCCGCCGGATTCAACTTATCCCGGTCACTCTGTACAACCTGTTCCTGTTTACTACATTCCAGGTCCTGTTCCGGTTCAACATGGGCAGGTCCCAGTCCAGCCGTTTACAATTCAGGGGCCTTATGTTCAGCCATACCCGGCGGTGGTGCCAGCTCAGATGCCGATGGGTTATCATCATGTGGTTCCAGGTTCGGCAGCCCAAGCATACAGTGGAGGGATGAGACCCGTGGGTGGTGTGCACCCATACGAAGCGGCGGCAAGGATTATTCCAGACGGCGTGAGGCAGCAGCACGCGTATCAAGCAGTTCCGAATTCCAGCGGTGCCCCTGTTTATCCGGTGATAAAGATGGCAAGTGGGGACGAATCTCAGAGAACTGGAGCGGATTATGGGACGGGTCGGGGCCCCAACATGGAATGA 1257 0.5465 MTTLHPAVEYDADSVASSPRSDHFHEPLPRVRFMCSFGGRILPRPHDNQLRYVGGDTRIVALHRSISFSALLLRLSKLSGTTNITVKYQLPNEDLDALISVTTDEDVENMMEEYERVAQNQNPRSARLRLFLFVKEEDSRTNSINSLLDGSANRESWFVDALNSGVGRLERGPSEASSMVSEVPDYLFGLENSDEVQTREPRLKFRPVINDNVSCSDPGSPAPVVSSPFCSTSSAANVPSMPNLPPVKTKPDNPVPVIESKENHIDGFQTGNPGGQIPHYPPDSTYPGHSVQPVPVYYIPGPVPVQHGQVPVQPFTIQGPYVQPYPAVVPAQMPMGYHHVVPGSAAQAYSGGMRPVGGVHPYEAAARIIPDGVRQQHAYQAVPNSSGAPVYPVIKMASGDESQRTGADYGTGRGPNME 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1097 418 CDD PB1_UP2 34 133 - -
Alju03g1097 418 MobiDBLite consensus disorder prediction 397 418 - -
Alju03g1097 418 SMART PB1_new 45 135 IPR000270 GO:0005515
Alju03g1097 418 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 50 135 - -
Alju03g1097 418 PANTHER OS05G0427100 PROTEIN-RELATED 12 350 - -
Alju03g1097 418 SUPERFAMILY CAD & PB1 domains 46 142 - -
Alju03g1097 418 Gene3D - 51 136 - -
Alju03g1097 418 Pfam PB1 domain 46 134 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1097 Alju-ChrAlju03 38977006 38978350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1097 20 225 MAP Kinase Kinase Kinase AT3G46920 39.815 6.09e-32 127