Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1095 ATGGGTGAGGAGGAGGAGGAAGTTTTGCCGGATCATCTGCGGTGCAAGCGCACTGACGGCCGCAAATGGCGGTGCAGCCGGAGAGTGATGGACAACGTAAAGCTCTGTGAGATTCACTATCTTCAAGGTCGGCATCGGCAATACAAAGAAAAGGTCCCGGAGTCGCTGAAGCTTCAGAGAAAGCGTAAGAAAGGGCTTAATAAGGATGACTCTGTTCTCAACAATGTCGAAGCGAAGGCACGGAAAGTGGTCAAGATGGCGAAGATGATGAGAAAAAGGATAAAAGTATCAGATGATTCGGAGTCAATGGAAGCTCCTATGGGGAAGAAGGTGTCCAAGCAGGGTAATAAGCAGTTGGAGTTGATAAGGATGGTGCTGAAGAGAGAGGTTGAGAAAAGGAAGAAGAAGAAGAAGATGAAGAGGAAGGAGGAGGAGGAGGAACGAGAGGAATTGCATTACAGTGATGGAGAGTTAACAAAAGAATTACCCAATGGGTTAATGGCAATTTCTATGGCATCAACGGCCCCAGAATACTGCAATGTAGGTTCTCAATGTGATGTTAAATTATGTGTTGATCATAAAGCAATTACTCCTCGTTACTTCAGGTCCAAGAATGTTGAGAGGCTGCCTGAGGGAAAGTTGCAGGTTTTGCCGTATGGACGCAAGTGTAAGAGGAAGAAGTGTCATTGGTGTCAAAGAAGTGATTCTTGGAATCTAATAAAGTGTTCAAGCTGTCAAAAAGAGTTTTTCTGCATGGACTGCATTAAAGAACGGTATTTTGATACTCAAAATGAAGTTAAGATGGCATGTCCAGTTTGTCGAGGAACTTGCTCATGTAAAGACTGCTTGAGAAGTAAATGTAAAGACAGCGAAACTAAGGAGTTTTTGGCTGGTAAAAGCAAAGTTGATAGAATACTGCATTTTCATTATTTGGTTTGTATGCTCCTTCCTATACTGAAACAAATAAATGAAGACCTCAATGCTGAGATAGAAACAGAAGCTAAATTCAGAGGTAAAAGACCATCTGATATTCACATCAAGCAAGTTGAATGTTGCGGCAATGACCAAACTTACTGCAACCAATGCAAAACACCCTTTTTGGATCTCCATAGAAGCTGTCCAATTTGTTCCTATAGCCTTTGCATGAGTTGTTGCAGGCAATCGTGTCGAAGGAACTCCTCTGAAGAAATCATTACATCTATTTCCAAGTCATCTGATGGGATGGACACCTGCCTTGCCAGTGAAAATCATCTTTTGGATAAGAAGGCCATCACCAACGGCAATTCAGTAGTGACCTTTTCATTGCATAAATGCACAAACTATGATGGTACTGGTGATGTATCTTGTCCACCAAAAGAACTTGGTGGTTGTGGTGATAATTTTCTTGAATTAAGATGTGTTTTTCCTTTAAGTCAGATCAAGGAGATGGAAGTAACAGCAGAAGAAATAGTTTGCAGCTATGACTTTCCTGAAACTTTGGACAAAAGTTCGAGCTGCTCATTGTGTCCAGACACAGATAATAAACTTGATGGATTTAAGCAGTTACAAGAAGCAGCTCTTAGAGAAGATTCGAAAGACAATTGGTTGTTTTATCCCACTGTTTTGGACATTGGTGGTGATAACTTTGAACACTTTCAGAAGCACTGGGGAAAAGGCCATCCTGTAGTAGTACGAGATGTGCTCCGAAATACATCAAACCTAAGTTGGGATCCACTGGTCATGTTTTCTACTTATCTTGAGGGTAGCATCTCAAGACATGAGAATGACAAGGATGAACTTGAAGCTTGTTTGGATTGGTGTGAGGTGGAAATTAACATTAGGCAGTGCTTTACTGGATCTCTTAAATGCCAGCCACAGAAAAACATGTGGCATGATATGCTGAAATTGAAGTGGTTATTGTCTTCCCAACTATTCAAAGAATGGTTTCCAGCTCATTTTGCTGACGTAATTGATGCTCTACCACTTCAAGAATACATGAATCCTACATCTGGTTTTCTGAATTTAGCTATAAATCTGGCCCAGGGGAGTGCAATGCATGACCTAGGACCATATATCTATCTTTCATATAGCTGTGGTGATGAACAGAGTGACTTTGTGACAAAACTATCTTATGATTCATATGATGTGGTCAATATTATGGCTCACACCACGGATGTCCCTCTCTCTACAGAACAACTGACTAAAATAAGGAAGCTGCTGAAAAGGCACCGAAGTCTTTGTCAAAGGGATTCTTCTGAAATTAATGCTGACCAATTAAAGGAACAGGGAGAGAAAGTAAATTCATTACTGCCTGCTGAAGACATTGAAATGGCCAGCTTGCATAGAAAGGAGAGAGAAGAAAAACATTTTTTCAGGAGAGTCAACAGAACAGGTTGCATCGTTACTGAAGCAACAGATATAGCTTCTCAAAATACAGACAGAAAAATTTCCCAGGATGAAGGATGTGACTCTGATTCTGATTCTGAAAATCCCTATGGAAGTTCAAATAATGATAGAGATGGAAAGTTTATCAAACATTCTGGTGCCCAGTGGGATGTCTTTCGTAGACAAGATGTTCCAAAGCTCTTAGAATACCTTAAAAGACACTCTGCTGAATTTTCTCCTTCCCATGACAATCACAAGCAGGTGGATCATCCACTTTTAGATCAGAGCTTCTTTCTTGACAACACTCACAAGATGAGGCTCAAGGAGGAATATAAAATTGAACCATGGACTTTTGAGCAACATGCCGGTGAAGCTGTCATTATTCCTGCTGGATGCCCTTACCAGATTAGAAATTCTAAGTGTTGTGTTCATGTTGTATTGGAATTTGTTTCCCCTGAGAATGTCGCCGAGTGTATCCAATTGATTGATGAAGCTCGTCAGCTTCCAGAAGACCACAAAGCAAATGTTGACCATCTTGAGGTGAAGAAAATGGCTCTTTATAGCATCGATTCTGCAATTAAAGAGATACGTGAACTTACCTCCAAAACGTGA 2976 0.4086 MGEEEEEVLPDHLRCKRTDGRKWRCSRRVMDNVKLCEIHYLQGRHRQYKEKVPESLKLQRKRKKGLNKDDSVLNNVEAKARKVVKMAKMMRKRIKVSDDSESMEAPMGKKVSKQGNKQLELIRMVLKREVEKRKKKKKMKRKEEEEEREELHYSDGELTKELPNGLMAISMASTAPEYCNVGSQCDVKLCVDHKAITPRYFRSKNVERLPEGKLQVLPYGRKCKRKKCHWCQRSDSWNLIKCSSCQKEFFCMDCIKERYFDTQNEVKMACPVCRGTCSCKDCLRSKCKDSETKEFLAGKSKVDRILHFHYLVCMLLPILKQINEDLNAEIETEAKFRGKRPSDIHIKQVECCGNDQTYCNQCKTPFLDLHRSCPICSYSLCMSCCRQSCRRNSSEEIITSISKSSDGMDTCLASENHLLDKKAITNGNSVVTFSLHKCTNYDGTGDVSCPPKELGGCGDNFLELRCVFPLSQIKEMEVTAEEIVCSYDFPETLDKSSSCSLCPDTDNKLDGFKQLQEAALREDSKDNWLFYPTVLDIGGDNFEHFQKHWGKGHPVVVRDVLRNTSNLSWDPLVMFSTYLEGSISRHENDKDELEACLDWCEVEINIRQCFTGSLKCQPQKNMWHDMLKLKWLLSSQLFKEWFPAHFADVIDALPLQEYMNPTSGFLNLAINLAQGSAMHDLGPYIYLSYSCGDEQSDFVTKLSYDSYDVVNIMAHTTDVPLSTEQLTKIRKLLKRHRSLCQRDSSEINADQLKEQGEKVNSLLPAEDIEMASLHRKEREEKHFFRRVNRTGCIVTEATDIASQNTDRKISQDEGCDSDSDSENPYGSSNNDRDGKFIKHSGAQWDVFRRQDVPKLLEYLKRHSAEFSPSHDNHKQVDHPLLDQSFFLDNTHKMRLKEEYKIEPWTFEQHAGEAVIIPAGCPYQIRNSKCCVHVVLEFVSPENVAECIQLIDEARQLPEDHKANVDHLEVKKMALYSIDSAIKEIRELTSKT 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1095 991 SUPERFAMILY Clavaminate synthase-like 541 978 - -
Alju03g1095 991 ProSiteProfiles WRC domain profile. 9 55 IPR014977 -
Alju03g1095 991 MobiDBLite consensus disorder prediction 132 152 - -
Alju03g1095 991 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 11 990 IPR045109 GO:0032454|GO:0033169
Alju03g1095 991 SMART cupin_9 642 954 IPR003347 -
Alju03g1095 991 Coils Coil 126 152 - -
Alju03g1095 991 Pfam JmjC domain, hydroxylase 840 935 IPR003347 -
Alju03g1095 991 Pfam WRC 10 51 IPR014977 -
Alju03g1095 991 MobiDBLite consensus disorder prediction 92 114 - -
Alju03g1095 991 ProSiteProfiles Zinc finger RING-type profile. 228 274 IPR001841 -
Alju03g1095 991 ProSiteProfiles JmjC domain profile. 661 954 IPR003347 -
Alju03g1095 991 MobiDBLite consensus disorder prediction 803 836 - -
Alju03g1095 991 Gene3D Cupin 535 963 - -
Alju03g1095 991 MobiDBLite consensus disorder prediction 92 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1095 Alju-ChrAlju03 38955421 38962964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1095 1 49 GRF Transcription Factor Family AT2G22840 46.939 9.73e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Alju03g1095 JmjC 2.1e-11 CL0029