Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1091 ATGGGAAGATCACCATGCTGTGACAAGAATGGCCTGAAGAAAGGCCCATGGACTCCTGAAGAAGACCACAAACTCATCGATTATATCCAGAAACATGGCTATGGCAATTGGAGGACCCTCCCTAAGAATGCTGGGTTGCAGAGGTGTGGAAAAAGCTGCCGTCTCCGTTGGACCAACTATCTCCGGCCAGACATCAAACGAGGTCGTTTCTCCTTCGAAGAAGAAGAAACCATCATTCAGCTTCACAGCATTCTCGGCAACAAGTGGTCGGCGATTGCTTCTCGTTTGCCAGGAAGAACAGACAACGAGATTAAGAACTATTGGAACACTCACATTCGTAAGAGGCTTCTTCGCATGGGGATTGATCCTGTGACTCACTCCCCACGTTTAGATCTCCTGGACCTCTCTTCCATTCTCTATTCTTCTTCTTCCTCACAACTCAACCCTAATAACAACGACCTCTCAACCCTGCAACTTAGTGGCCTCCAAGCTCCTTTACTTAACCCACACCTTCTCAAGCTAGCTTCTTCCCTCCTTTCACGAAGAGATCATCATCATCACAGCCAAAACCTCAACTTCTGCAACCATCAAATGACAGATAATACCTCAATGTTTCAAGACATGGCCTTACCTGAAATATCTCAGCCAATGGTCCCACCCAATGTGGATCCTTACATTTCCTCAAACTTCACCGAGTTTGGAGATTGGCAAAACAACAATGATGCTAATACTCTAACTCAGGACTATGTTCCTGAGTTGTTACCGAGTTTCCAATATTACAGTTCTGATAATGATCAGTATCATCAGAATCTTGTGGATCTTCAGAATAATGTTAATAACAACAACTTTGGCTTGGCCTCGGTTCAATCTACGCCGTCGAATTCAAATTCGACGTACATCAACGGAGGAGGTAGCAGCACGACGGAGGATGAGAGAGAGAGCTATAACAGCAGCAACATGTTCAACTTTGAGATGCCTGAGATTTTAGATGTTAATGACTTCATGTAA 1008 0.4464 MGRSPCCDKNGLKKGPWTPEEDHKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDLSSILYSSSSSQLNPNNNDLSTLQLSGLQAPLLNPHLLKLASSLLSRRDHHHHSQNLNFCNHQMTDNTSMFQDMALPEISQPMVPPNVDPYISSNFTEFGDWQNNNDANTLTQDYVPELLPSFQYYSSDNDQYHQNLVDLQNNVNNNNFGLASVQSTPSNSNSTYINGGGSSTTEDERESYNSSNMFNFEMPEILDVNDFM 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1091 335 CDD SANT 69 112 IPR001005 -
Alju03g1091 335 Gene3D - 69 116 - -
Alju03g1091 335 SMART sant 66 114 IPR001005 -
Alju03g1091 335 SMART sant 13 63 IPR001005 -
Alju03g1091 335 CDD SANT 16 61 IPR001005 -
Alju03g1091 335 FunFam Transcription factor MYB39 69 130 - -
Alju03g1091 335 FunFam MYB-related transcription factor 13 66 - -
Alju03g1091 335 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Alju03g1091 335 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju03g1091 335 MobiDBLite consensus disorder prediction 283 315 - -
Alju03g1091 335 Gene3D - 13 66 - -
Alju03g1091 335 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Alju03g1091 335 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju03g1091 335 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju03g1091 335 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 258 - -
Alju03g1091 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Alju03g1091 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1091 Alju-ChrAlju03 38913832 38915044 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1091 1 335 MYB Transcription Factor Family AT4G21440 54.986 3.12e-113 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju03g1091 Myb_DNA-binding 2.5e-16 CL0123