LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju03g1054	ATGGCAGCACTAGACGTTAATGAAATTGAAGTGCCAGTGTTCCTTCAGATGATTCCTTTCCACGACGCTTTCGCTTTCCCTAAAACGTCTAAAACTCTCACTGTTTGGACGTGTGCACTTCCCGTCCTCAAATTCGCGTTCCATTTTTTTGGCCCTCCCACTTCTTCCCGTGGAATTTCATTTCTGCTTCAAAACATGTTGGGATCCTTAGCTTATTGCCAAAGTTTTAAGGGATATGGTATTACCAAACACAAGAGTTCAATTTGGACTCACCCTCGAGCTATTTCCCAAATTTGTAGAAGTTCTATTTCCATGGTATGCTCATATAATAAGCAAGGGATAACTCTATCACATAGCTTTAGCCATAAGATATGTCATGAAAATTCTGGATCGGGAATGTTCTGTAGCACAACTTTCATTGCTCCCACATTATCTGGTTGGAAAGGACTCTATTTCTCAAGGTATAGGCAATTACATTGGGAACGGTTTAGGGCAAATGTGGCATATGATGTTGCTGGTGCTGTTGAAGTAATGAATGATCTAGGATTGGATACTCTTACATTCTTGGCTGTGACCGTGTTAATTGTGCCCACATTCAAGTTAATGAAAGCCAGTCCTATACTTGGTTTCTTTTTTGCTGGTGTGGTACTCAATCAGTTTGGTTTAATAAGAAATATTACAGATGTGAAGGTTTTGTCTGAATGGGGGATCCTTTTCTTGCTGTTTGAGATGGGTTTGGAGCTTTCACTTGCACGTCTGAAAGCTCTTGCTAAATATGCCTTTGGGATGGGACTGGCTCAGGTTGTATTATCTACTCTAGCATTTACTTCTTTTGAACTTCCACCTAATGGGGCTATTGGAACAAAAATTTTGGAGTTCCTTTTCCACTCAAGGCCTGATCTGGTGAACATTAGAAGTGTCGATGAAGCTGTAGTGATTGGTGCTGCTCTCTCCCTGTCTTCTTCTGCATTTGTTCTACAGCTTCTTGCAGAGAAAGGTGAACTTCCTACGAGATTTGGTTCAGCAACTTTAGGAATTCTTCTTTTGCAGGACATAGCTGTTGTCCCTCTGTTAGTTATTCTCCCAATACTGGAGAGCCAGAATCTAGCTGAGGAAAGTATTTGGCCAATGCTTGCTCAAGAAAGTTTGAAGGCCTTAGGTGGATTGGGTCTTCTTTCTCTTGGTGGGAAGTACATTCTGAGAAGAGTTTTTAAGGTTGTTGCAGATGCAAGGAGCTCAGAGGCTTTTGTTGCTCTTTGCTTGATGACCATTGCAGGGACTTCACTATTTACGCAGAAGTTGGGCTTTAGTGATTCGCTTGGTGCATTTTTAGCTGGAGCACTCTTGGCGGAGACAAATTTTAGGACGCAGATTGAAGCTGACATAAGACCATTTAGAGGCTTACTTCTTGGGTTATTTTTTCTAACTACTGGGACTTCCATCGACTTGCAGCTCCTTTTCCGAGAGTGGCCAAATGTACTTTCACTCTTGGCAGGTTTAATTGTTATCAAAACATTGATTATTACAGCTATTGGGCCTCGTGTGGGACTTACTTTACAAGAGAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGCGAGTTTGGATTTGTTGTCTTCTCTTTAGCAAACGGACTTGGAGTACTGCCGCTTGAGCTCAACAAGTTGCTCATAATTGTTGTTGTATTGTCAATGGCGTTAACCCCATTTCTTAATGAAGCTGGAAGAAGGGCTGCTGATTTTCTTGATGACCAATTTGATGCTGAAAATAAAGCTTCAGAGATGGTAAATTTCAATGCCAGTGAACCTGTTGTTATCCTTGGATTTGGACAAATGGGTCAGGTCCTTGCCAATTTCTTGTCCAACCCATTGGCTTCAGGAGGAGACAGTGATGCCGGAGGATGGCCTTATGTAGCTTTTGATCTTGACCCAACAGTAGTAAGGGCAGCTAGAAACCTTCGTTTTCCAATTCTCTATGGGGATGGATCACGCCCAGATGTTCTTCGATCTGCTGGTATCTCTTCTCCAAAAGCTATCATAATTATGTATGCTGGGAAGGAAAAAACAATTGAATCCGTTCAGAGGCTGCGATTCACTTTCCCTACAATTCCAATTTATGCCAGAGCTCAAGATCTCAAGCATCTTTTAGAACTGAAGAAAGCCGGCGCAACAGATGCCATTTTGGAAAATGCAGAGACTAGCTTACAGATGGGTTCTAAGCTTCTGAAAGATCTCGGTGTGATGTCTGATGATATAGCATTTCTGAGCCAGCTTATTCGAGACTCCATGGAAATACAAGCTCAAGAAGCTCTAAGCCAGTCTGAGTATCGAGAACTAGATATGATGAAACCACTTCAGGTGAGAATTGATGATTTGATGGAGACCCGTGAACCAGTGGCAACAACTTCACCAGAGTATGAATTATCAGAACTGAGCCAGACAGATAAAGCTTTGTTGGGTAAAAAACAGACGGAAGAAGATTCTGATGAACAAGGTTTTGATCCTATGGAATCTGTGAGCTTAGAAGGACATGGTGTTCTATATAGTAAAGAAGGCACTGAGGAAAGCTCAGTTGCTAAATACCCAGACACTTTGGGAGAGAAGAATCTGGCGGACCCATCAATCCCTTTACAAACAGCCATGGAAGAGCCCTAA	2655	0.4211	MAALDVNEIEVPVFLQMIPFHDAFAFPKTSKTLTVWTCALPVLKFAFHFFGPPTSSRGISFLLQNMLGSLAYCQSFKGYGITKHKSSIWTHPRAISQICRSSISMVCSYNKQGITLSHSFSHKICHENSGSGMFCSTTFIAPTLSGWKGLYFSRYRQLHWERFRANVAYDVAGAVEVMNDLGLDTLTFLAVTVLIVPTFKLMKASPILGFFFAGVVLNQFGLIRNITDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGLAQVVLSTLAFTSFELPPNGAIGTKILEFLFHSRPDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDIAVVPLLVILPILESQNLAEESIWPMLAQESLKALGGLGLLSLGGKYILRRVFKVVADARSSEAFVALCLMTIAGTSLFTQKLGFSDSLGAFLAGALLAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDLQLLFREWPNVLSLLAGLIVIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANGLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAADFLDDQFDAENKASEMVNFNASEPVVILGFGQMGQVLANFLSNPLASGGDSDAGGWPYVAFDLDPTVVRAARNLRFPILYGDGSRPDVLRSAGISSPKAIIIMYAGKEKTIESVQRLRFTFPTIPIYARAQDLKHLLELKKAGATDAILENAETSLQMGSKLLKDLGVMSDDIAFLSQLIRDSMEIQAQEALSQSEYRELDMMKPLQVRIDDLMETREPVATTSPEYELSELSQTDKALLGKKQTEEDSDEQGFDPMESVSLEGHGVLYSKEGTEESSVAKYPDTLGEKNLADPSIPLQTAMEEP	884

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju03g1054	884	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	602	746	IPR036291	-
	Alju03g1054	884	MobiDBLite	consensus disorder prediction	821	884	-	-
	Alju03g1054	884	Gene3D	-	180	579	IPR038770	-
	Alju03g1054	884	PANTHER	K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC	164	810	-	-
	Alju03g1054	884	Pfam	Sodium/hydrogen exchanger family	187	572	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Alju03g1054	884	ProSiteProfiles	RCK N-terminal domain profile.	603	735	IPR003148	GO:0006813
	Alju03g1054	884	Pfam	TrkA-N domain	604	727	IPR003148	GO:0006813
	Alju03g1054	884	FunFam	K(+) efflux antiporter 3, chloroplastic	180	579	-	-
	Alju03g1054	884	FunFam	Glutathione-regulated potassium-efflux system protein KefB	601	773	-	-
	Alju03g1054	884	Gene3D	-	601	772	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju03g1054	Alju-ChrAlju03	38285521	38295012	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju03g1054	63	817	Inorganic Solute Cotransporters	AT4G04850	70.395	0.0	1000