Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1049 ATGGAGAATTACACGTACCCTTCGTACCCTGACTCCGGCGAATCGTCTCCGCGCTCCAGAGAGGTTGAATTCGAGAACCCTCCGCCGTGGGACGACCAGCAACCGCCGCCTAATTACAAAGCTAAGTTCATGTGCAGCTATGGCGGGAAGATCCAGCCTCGCAGCCACGACAACCAGCTCTCCTACGTCGGCGGCGAGACCAAGATCCTCGCCGTTGACCTCAACATCAAGTTCTCCGCCATGATCTCCAAGCTCTCCGCTCTCTGCGACGGTGCCGATGTCACCTTTAAGTACCAGCTCCCCGGAGAAGAACTCGACGCCCTGATTTCCGTCACCAACGACGACGATCTCGAACACATGATGCACGAGTATGATCGCCTGTACCGTGCTTCCGCTAAGCCCGCTCGTATGAGGCTCTTCCTCTTCCCTGCAAATAATAGCCAGCCATCGAGTTTTTCTTCCGATCAGGACCGCTTCGTGGAGGCTCTGAATTCGGGTCCTGGACCGACTACGCCCGACCCGGTTAAGCCGGCTCCTGTTCCTGCTGGCAGCAACGTCGACTACCTCTTTGGTCTGGAGAAAGGAGTACCTCCGGCGCAGCAACAGCCTATGGCCGTTAAGTTTCATGACCCTGTTCCTGGACCGGTGGTGCCACCTCTGGAGTACCAAGCAAGAGGCGGACCTGAACGGGCCATCGGATCGGATCCTTCTGTGAACTCGATTGAAGTTCAAAGGCAGTTTCAGAGGATGCAAATTGGGGATCATGATCAGCCTGTGTATAGAAGAAAGAGCGAGGATAATTCGGCAGGAGGATATGCAGGCGGAGATTATTATGTTCAGAAATTCGCCGACAAGGCTCCTCCGTCGAATTTGCCGGCCGTAGCACCATCAGCTGGAGGTTATTGGCAGGAAAAACAAGTTCCCGGCGAGGGTTTTCCACCTTCGATGACGGCGTCAAACGGATCCGGAGGATCAGACCAGCCGGTTTATGTTATCCCACAGCCTGGAACTTTCTATCACGCGCCGCCGGTGGTGCGTCCTCCGGCGACTCAAGGTTACTACGCCGTGCAGCGAATGGTTTCTGATGGCTACCGTGAGCAACCGGTTTACAGCACGGCGGCGGCGCCCCGAGCGCCATTTTCAGCGGCTCCGGCAACCTTGGCACCGGCTCAGCCGGTAAAATCTGCCGCGTATACGGATGGGTTCAACGTGATTCGCCAAACTGGGCTACCGGCGGATAACTCAGCAGCGTATGCACAGGTGGCGTACGATGGTTCGGCAGGGAGACAGTTTTACTATACTACGCCGGCGGGAGTGGTTCATCAGCCACCGTACCAAGGGGTTGTTTCAACGGTGGGTGCTGATATAAGACCCGCCGGAGTATCATTGGGTCAGGATCTTAAAGGGGTCAACAAGGTTTCCCAAGGTTAA 1431 0.5604 MENYTYPSYPDSGESSPRSREVEFENPPPWDDQQPPPNYKAKFMCSYGGKIQPRSHDNQLSYVGGETKILAVDLNIKFSAMISKLSALCDGADVTFKYQLPGEELDALISVTNDDDLEHMMHEYDRLYRASAKPARMRLFLFPANNSQPSSFSSDQDRFVEALNSGPGPTTPDPVKPAPVPAGSNVDYLFGLEKGVPPAQQQPMAVKFHDPVPGPVVPPLEYQARGGPERAIGSDPSVNSIEVQRQFQRMQIGDHDQPVYRRKSEDNSAGGYAGGDYYVQKFADKAPPSNLPAVAPSAGGYWQEKQVPGEGFPPSMTASNGSGGSDQPVYVIPQPGTFYHAPPVVRPPATQGYYAVQRMVSDGYREQPVYSTAAAPRAPFSAAPATLAPAQPVKSAAYTDGFNVIRQTGLPADNSAAYAQVAYDGSAGRQFYYTTPAGVVHQPPYQGVVSTVGADIRPAGVSLGQDLKGVNKVSQG 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1049 476 MobiDBLite consensus disorder prediction 313 327 - -
Alju03g1049 476 CDD PB1_UP2 44 142 - -
Alju03g1049 476 SMART PB1_new 55 144 IPR000270 GO:0005515
Alju03g1049 476 MobiDBLite consensus disorder prediction 1 15 - -
Alju03g1049 476 MobiDBLite consensus disorder prediction 304 327 - -
Alju03g1049 476 MobiDBLite consensus disorder prediction 1 38 - -
Alju03g1049 476 Gene3D - 61 143 - -
Alju03g1049 476 Pfam PB1 domain 56 143 IPR000270 GO:0005515
Alju03g1049 476 PANTHER OS05G0427100 PROTEIN-RELATED 9 381 - -
Alju03g1049 476 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 60 144 - -
Alju03g1049 476 SUPERFAMILY CAD & PB1 domains 56 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1049 Alju-ChrAlju03 38217130 38218560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1049 39 165 MAP Kinase Kinase Kinase AT5G57610 44.030 1.86e-27 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g1049 03 38217130 38218560 Alju03g1049 03 38217130 38218560 CCT
Alju03g1049 03 38217130 38218560 Alju03g1049 03 38217130 38218560 ECH