LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju03g0981	ATGGAATCTTTGACAGCTACTTCGACGACGACGCAGAAACTTGAGGTTCACTTTGTTTTGATACCTGCAATGGCTCCAGGTCATCTTCTTCCCATGGCGGACTTGGCGAGACTGTTAGCTCGGCGAAATGTGAAGGTGACTATAATGACCTCACCTCTAAATGCTGTTCGAATTCGAGCAAATATTGATAGAGAGATACAGTGTGGCTCACCAATCAGCGTTCAATATTTTCGATTCCCAAATGCTGAGGCTGGTTTACCAGAGGGATGTGAGAACTTAGACACTTTACCTTCCATGAATCTTCTACCCAACTTTGGGAAAGCTGTATCTATGTTGCAGGAACCAGTTGAAAAACTCATTGAAAAGCTTGTTAGCCCCACTACTCCCACCTGCGTGATACATGACAAATACCTTCCATTTGTAGCTGATATTGGCAAGAAGCTCAAAGTTCCAACAATAACATTCGATGGTACCAACTGTTTCACTTTATTATCTGATCACTGTCTGTATAATAATTCTGAAGTCTATGAGAACGTGTCCGATTCAGACCCATTGGTTGTACCTGGATTGCCCCATAGAATTGTGTTTAAAAAATCTCAGCTTCCCGAGTGGTTTACTCTTAACAGAGGCAAAGACATCAGTGGTTTTCGTGAGAAAACAAGGAAAGCTGAAGAAGAAGCTTATGGGTTTTATAATGAGAAGGTGGTTGTTCAGTTGTTGGAGACAGGTGTGAGGGTGGGAGTTGAGGATGCTGTGCATCTTGGGGAAGAAGAAAAGTATGGGGTACAAGTGAAAAGGGAGAAAGTGAAGGAGGCAATAGCAAGAGTAATGGGTGAAGAAGATGAAGAGAGTGAAAGGATAAGAGAAAGGGCAAGGAATTATGCAGAGAAGGCAAACAAGGTAATGCAGAAAGGTGGTTCTTCTTATCTTAATTTATCATTACTGATCGATGGCATAATACAGCAAGGTTTTGCTTTCTACTGTGGCGCTTTTTCTATAGGTACCGAACTCACATCACACAAACAGATTCTCTCTTCAATTTCTCCGTCCCAATTCCCAGCTTCACATTCCTTCTTCTTCTTCGTTGAGCAAGCTCTGACTCTTGCTCTTGCTCTGCAAATGGAGAGCTATGCTTTGCACTCCCTCTCCACTTCAACCTCCTTCTCTCTCTCCTCTCGCACCTCCTTGCTCCGCCATCGTTCTCGCTCCATTTCGAATTCTCAATTCTCTCTTCCACCGAACCCCAGTTTCCAATCCCATTCACTCCCATCTCTCCGATCATCTCTCTCTTGTTTCTCTACCTCCCATACTTCCAAATCTTCCTTCTCTATCAATCCTACCCCTAAGCCTCACATAGCCCACAAGCGAGTTCAAGCTTCTGCTTCTTCTTCTTCTTCCTCCTCGTCTTCTCCGCCACCACTCCCACCTGCTACACAAGGCGCCAAGCTCATTCCTCTGATTATTTCCGTAGGTATTGGTCTCGCAGTTCGCTTCTTAGTGCCCAGACCAGCTGAAGTCACTGCTCAGGCATGGCAATTGCTCTCAATTTTCTTGTCTACTATTGCGGGACTTGTTTTGAGTCCATTGCCTGTAGGGGCTTGGGCTTTTTTGGGCTTGACGGTTTCCATTGTCACGAAAACTCTGACTTTCTCGGCGGCTTTCAGCGCGTTCACGAACGAGGTGATCTGGTTGATTGTGATCTCCTTCTTCTTTGCTCGTGGATTCGTGAAGACTGGGCTGGGGGATAGGATCGCGACGTACTTCGTTAAGTGGTTGGGGAAGAGTACGTTGGGACTGTCTTATGGGTTGACGTTCAGTGAGGCGCTGATTGCGCCGGCGATGCCGAGCACCACCGCGAGAGCCGGTGGGGTGTTCTTGCCGATTATTAAGTCACTGTCGCTTTCGGCCGGGAGTCAGCCGGATCATCCTTCGGCTAAGAAGCTGGGTTCTTACCTCGTTCAGACACAATTTCAGTCTGCTGGTAATTCTAGTGCTCTTTTCCTGACTGCTGCAGCTCAAAACTTACTCTGTATCAAATTAGCGGAGGAGCTGGGGGTGATAGTTTCCAGCCCTTGGGTTTCATGGTTTAAGGCAGCTAGTCTACCTGCATTGGTTTGTCTTCTTGCTACACCATTGATATTATACAAGCTTTATCCACCTGAAATTAAAGATACACCGGAAGCACCAGCCATGGCTGCAAAGAAATTGGAAGGCATGGGTCCTGTCACACGAAACGAATGGATTATGGTTGGTACAATGCTTCTTGCGGTTTCTTTATGGATCTTTGGAGACACCCTTGGAATTGCAAGCGCCGTTGCTGCAATGATTGGTTTGTCAATACTCCTTGTTCTAGGAGTCCTTGACTGGAATGACTGCTTGAATGAAAAGTCTGCATGGGATACCTTGGCTTGGTTCGCCATTCTAGTAGGCATGGCTGGCCAGTTGACAAATCTCGGTATTGTGACCTGGATGTCTGATTGTGTGGCCAACTCCCTTCAGTCCTTTTCTTTAAGTTGGCCTGCTTCTCTACTAGTTCTTCAGGCAGCTTATTTCTTCATCCACTACCTTTTTGCAAGTCAGACTGGACATGTGGGGGCTTTGTATTCTGCATTTCTGGCCATGCACAGAGCAGCTGGTGTACCTAGTGTTTTGGCTGCCCTTCTACTAGGTTATAACACTAATCTTTTTGGTGCAATAACACATTATAGTAGTGGTCAAGCTGCTGTATACTATGGAGCTGGCTATGTAGATCTTCCTGATATATTAAAAATGGGTTTAGTTATGGCATTTGTTAATGCTATCATCTGGGGAGTAGTTGGCTCTTTCTGGTGGAAATTTTTGGGCTTATATTGA	2853	0.456	MESLTATSTTTQKLEVHFVLIPAMAPGHLLPMADLARLLARRNVKVTIMTSPLNAVRIRANIDREIQCGSPISVQYFRFPNAEAGLPEGCENLDTLPSMNLLPNFGKAVSMLQEPVEKLIEKLVSPTTPTCVIHDKYLPFVADIGKKLKVPTITFDGTNCFTLLSDHCLYNNSEVYENVSDSDPLVVPGLPHRIVFKKSQLPEWFTLNRGKDISGFREKTRKAEEEAYGFYNEKVVVQLLETGVRVGVEDAVHLGEEEKYGVQVKREKVKEAIARVMGEEDEESERIRERARNYAEKANKVMQKGGSSYLNLSLLIDGIIQQGFAFYCGAFSIGTELTSHKQILSSISPSQFPASHSFFFFVEQALTLALALQMESYALHSLSTSTSFSLSSRTSLLRHRSRSISNSQFSLPPNPSFQSHSLPSLRSSLSCFSTSHTSKSSFSINPTPKPHIAHKRVQASASSSSSSSSSPPPLPPATQGAKLIPLIISVGIGLAVRFLVPRPAEVTAQAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTVSIVTKTLTFSAAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWLGKSTLGLSYGLTFSEALIAPAMPSTTARAGGVFLPIIKSLSLSAGSQPDHPSAKKLGSYLVQTQFQSAGNSSALFLTAAAQNLLCIKLAEELGVIVSSPWVSWFKAASLPALVCLLATPLILYKLYPPEIKDTPEAPAMAAKKLEGMGPVTRNEWIMVGTMLLAVSLWIFGDTLGIASAVAAMIGLSILLVLGVLDWNDCLNEKSAWDTLAWFAILVGMAGQLTNLGIVTWMSDCVANSLQSFSLSWPASLLVLQAAYFFIHYLFASQTGHVGALYSAFLAMHRAAGVPSVLAALLLGYNTNLFGAITHYSSGQAAVYYGAGYVDLPDILKMGLVMAFVNAIIWGVVGSFWWKFLGLY	950

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju03g0981	950	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	16	321	-	-
	Alju03g0981	950	NCBIfam	DASS family sodium-coupled anion symporter	501	944	IPR001898	GO:0016020\|GO:0022857\|GO:0055085
	Alju03g0981	950	CDD	ArsB_NhaD_permease	521	935	-	-
	Alju03g0981	950	MobiDBLite	consensus disorder prediction	453	477	-	-
	Alju03g0981	950	Gene3D	Glycogen Phosphorylase B;	302	316	-	-
	Alju03g0981	950	PANTHER	DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC	443	950	IPR030676	-
	Alju03g0981	950	Gene3D	Glycogen Phosphorylase B;	231	301	-	-
	Alju03g0981	950	Gene3D	Glycogen Phosphorylase B;	8	230	-	-
	Alju03g0981	950	Pfam	Sodium:sulfate symporter transmembrane region	483	949	IPR001898	GO:0016020\|GO:0022857\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju03g0981	Alju-ChrAlju03	37188047	37198759	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju03g0981	374	950	Antiporters	AT5G64290	73.504	0.0	833