Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0980 ATGAATCAAATGGAAGCAACTTGTCATCATATCCTTGAACTCTACCTTGTTGCCTCTAATGCACTCTATAGCAAGAAGGAGAGGAATCAAATTGGAGTAGGAGGAAGGTACGGTGGTCAGACTTTGGCCGCCGGCAAGGTGGTCTGTGAACTGGACGAAGAGGATGCCATGGACAACGGCGAAGACATCAACGATCCAAGTTACTGGGAAAAGCCTATGGCGAGTTTTCTCATACGTAATCATTCGGACCAGCTCCGCTGCATTGCATCTTCTCCAGATTCCAAGCTTCATTACCCTCTCTTCGTCGATTTCGCAGAGTTGATGGACGATGACCCTCACCTTGCCCACCTCATCTTCACCGAACCCGCTACATATTTACAAATATTTGATCAGGCTGCTGTTTGGGCTCATAAAATCATTTTGGGGGAATCGGGAGCAGAAGAGAAATGGGTTGAGAAAAAGACGATTCATGTCCGCATCAATACAAGTGGCTCTCCACTTGAATGTCCGGAGTCTTTTCCAAGCATAGGACGTATTAGAGTGAAACACCGGGGGATTCTTCTAACTCTAAAAGGGACAGTAATCAGGTCTGGAGCAATAAAGATGCATGAAGGAGAAAGGGAGTATATGTGCCTAAAGTGCAAGAAGAGCTTCCTAGTTTATCCAGAGCTGGAAGCACGAAACTCCATAACTCTACCTTCAATTTGCCAAGTTCAGGGGTCTAAGCCCTGTGGAGGAATAAAATTCCAGTATGTAGACAATACTATAGTATATCATGATTATCAAGAGATTAAAATCCAAGAAAGCACACAGGTTCTTGGTGTTGGGGTTATCCCTCGTTCAATTCTTGTCATCTTGAAGGATGACCTTGTTGACATTGTTAAAGCTGGAGATGATGTAATTGTTTCCGGGGTGTTGACAGCAAAATGGTCATCAGAAGTCAAAGATGTGCGCTGTGATCTTGATCCTGTACTAATCGCCAACCATGTAAGGAGAACAAATGAACTGAAGTCAGAAATTGATATTCCTGTTGATGTTGTTATGAAATTCAAACAGTTCTGGATCCATTTTAAGGATTGTCCTCTGAAAGGGAGGAATGCTATTCTACGAGGAATTTGCCCACAAGTATTTGGACTCTTCACTGTCAAGCTGGCAGTTGCATTAACACTTATTGGAGGTGTGCAACATGTCCATGCTTCTGGAACAAAGGTACGAGGGGAACCCCACTTACTCTTGGTTGGTGATCCTGGCACAGGGAAATCTCAGTTTTTGAAATTTGCAGTAAAATTAAGTAATAGATCTGTAGTTACGACTGGCATGGGAAGCACCAGTGCTGGATTGACTGTTACTGCAGTGAAGGATGGAGGAGAATGGATGTTGGAAGCTGGAGCTCTTGTTCTTGCAGATGGGGGTTTGTGTTGCATAGATGAATTTGATAGTATGAGGGAACATGACAGAGCAACCATACATGAAGCCATGGAGCAGCAGACCATAAGTGTTGCCAAGGCTGGTCTTGTGACAACGCTCAGCACTAGAACAACAGTGTTTGGTGCTACCAATCCTAAGGGACATTACGATCCTGATCAACCTCTATCTATCAACACAACACTCTCAGGTCCTTTATTAAGCAGGTTTGATATAGTCCTTGTGCTCTTGGATACAAAGAATCCTGAATGGGATGCGGTAGTTTCATCTCATATTCTTAGTGAGGCAGAACCAGATGGAACTAGGCAAGATGAAGATCTAGCAAATATCTGGCCTCTTTCTACACTCAAGAGGTATATTCACTACGTTAAAGAAACCTTCAAACCAGTCCTTACAAGAGAGGCTGAGACAGTCATCTCCAGTTACTATCAACTGCAAAGGAAATCTGCAACTCATAATGCAGCTAGGACAACTGTTCGTATGCTGGAAAGTTTGGTTCGCCTAGCTCAAGCCCATGCAAGGTTGATGTTCAGAAATGAGGTGACTAGATTAGATGCCATCACAGCCATTTTATGCATAGAATCTTCAATGACTACCTCTGCTATTGTGGATTGCATTGGCAATGCTCTGCATTCCAATTTTACTGAAAACCCTGACGACGAATATACCAAACAGGAGAGGATGATACTAGGAAAATTGGGAATCCATGAATCCTCAGACATTAGCATCATAGAAGGCTGA 2166 0.4335 MNQMEATCHHILELYLVASNALYSKKERNQIGVGGRYGGQTLAAGKVVCELDEEDAMDNGEDINDPSYWEKPMASFLIRNHSDQLRCIASSPDSKLHYPLFVDFAELMDDDPHLAHLIFTEPATYLQIFDQAAVWAHKIILGESGAEEKWVEKKTIHVRINTSGSPLECPESFPSIGRIRVKHRGILLTLKGTVIRSGAIKMHEGEREYMCLKCKKSFLVYPELEARNSITLPSICQVQGSKPCGGIKFQYVDNTIVYHDYQEIKIQESTQVLGVGVIPRSILVILKDDLVDIVKAGDDVIVSGVLTAKWSSEVKDVRCDLDPVLIANHVRRTNELKSEIDIPVDVVMKFKQFWIHFKDCPLKGRNAILRGICPQVFGLFTVKLAVALTLIGGVQHVHASGTKVRGEPHLLLVGDPGTGKSQFLKFAVKLSNRSVVTTGMGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTTVFGATNPKGHYDPDQPLSINTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILSEAEPDGTRQDEDLANIWPLSTLKRYIHYVKETFKPVLTREAETVISSYYQLQRKSATHNAARTTVRMLESLVRLAQAHARLMFRNEVTRLDAITAILCIESSMTTSAIVDCIGNALHSNFTENPDDEYTKQERMILGKLGIHESSDISIIEG 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0980 721 Gene3D - 203 259 - -
Alju03g0980 721 FunFam Probable DNA helicase MCM9 342 676 - -
Alju03g0980 721 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 374 681 IPR027417 -
Alju03g0980 721 Pfam MCM OB domain 178 307 IPR033762 -
Alju03g0980 721 PRINTS Mini-chromosome maintenance (MCM) protein family signature 541 549 IPR001208 GO:0003677|GO:0005524|GO:0032508
Alju03g0980 721 PRINTS Mini-chromosome maintenance (MCM) protein family signature 405 420 IPR001208 GO:0003677|GO:0005524|GO:0032508
Alju03g0980 721 PRINTS Mini-chromosome maintenance (MCM) protein family signature 463 477 IPR001208 GO:0003677|GO:0005524|GO:0032508
Alju03g0980 721 PRINTS Mini-chromosome maintenance (MCM) protein family signature 491 504 IPR001208 GO:0003677|GO:0005524|GO:0032508
Alju03g0980 721 SMART AAA_5 406 555 IPR003593 GO:0016887
Alju03g0980 721 Pfam MCM AAA-lid domain 590 671 IPR041562 -
Alju03g0980 721 CDD MCM9 367 671 - -
Alju03g0980 721 SUPERFAMILY Nucleic acid-binding proteins 97 315 IPR012340 -
Alju03g0980 721 ProSiteProfiles MCM family domain profile. 364 567 IPR001208 GO:0003677|GO:0005524|GO:0032508
Alju03g0980 721 Pfam MCM P-loop domain 366 569 IPR001208 GO:0003677|GO:0005524|GO:0032508
Alju03g0980 721 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 99 696 IPR031327 GO:0003677|GO:0005524|GO:0032508
Alju03g0980 721 SMART mcm 172 673 IPR031327 GO:0003677|GO:0005524|GO:0032508
Alju03g0980 721 Gene3D - 362 677 IPR027417 -
Alju03g0980 721 Gene3D - 178 308 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0980 Alju-ChrAlju03 37177816 37187056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0980 73 696 Core DNA Replication Machinery Family AT2G14050 76.555 0.0 996