Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0977 ATGTCTGGAGATGAACTCCTGCAGACAAAAGCAAAGCTTGATAACTTAGTAGTGATGAAGCCCAACACAGAAAAAAGCAGAGGAATTGAGAGAGAAGAGGGAATTTTCATGACATGGGAGGACTTGTTGGTGACAGTGGCTGGAAGTGGGAAGAGAAGGAAACCAATATTGAAGGGTCTCACTGGTTTTGCCAAACCAGCACAGCTTTTGGCTATAATGGGTCCCTCTGGTAGTGGCAAAACCACACTCCTTGATGCTTTAGCAGGAAGATTGAGTTCAAACACAAAGCAAACAGGCAATATTCTTATCAACGGCCACAAACAAGCACTAGCTTATGGAACATCCGCATATGTCACTCATGATGATGCTCTCTTGTCAACTTTAACAGCCAAAGAAGCTTTATACTACTCATGTCAGCTTCAACTTCCAGATTCAATGTCCATGAAAGAGAAGAAAGAAAGAGCAGATTCTACACTCAGAGAAATGGGTCTCCAAGACGCCATTGACACAAGGATTGGAGGTTGGACTTCCAAAGGCCTTAGCAGTGGTCAAAAGAGAAGACTTAGCATTTGCATTGAGATTCTAACTCGTCCCAAACTTTTGTTCCTTGATGAACCAACCAGTGGGCTTGATAGTGCAGCTTCTTATTATGTTATGAGCAGAATTGCCAGTCTAAATCTAAGAGATGGCATTCAAAGGACTATTGTAGCAGCTATACATCAGCCTAGAAGTGAAGTTTTTCAACTTTTCCACAATCTTTGTCTTTTGTCTTCTGGGGAAACTGTATATTTTGGCCTTGCTTCAGCTGCAACTGAGTTTTTTGCTTCAAATGGTTTTCCTTGCCCAAGTCTGTACAATCCTTCCGATCATTTCTTGAGGATCATAAACAAAGATTTTGAGCAGGATGCTGAAGAAGGTTTTGGTAAAGGAGTAAACACAGAAGAAGCAATTAATATCCTCGTAAAGTCCTATATGTCATCAAAAATTGGGAAACAAACTCAGAAACAAGTGGAAGAAATAATTGACAGTAATTCCAATGGAATAGAGAAGAAGAAGAGAAGAATTAATGCTGGATACTTTACACAGTGCCTCATTATTACAAGAAGATCTTCCATTCATATGTTTCGTGATCTGAGCAATTTCTGGCTACGCCTAACTGTTTATGCTGTAATAGCTTTAAGTCTAGGAACTATATACTATGACATTGGTTCAAGTATTGGATCTATTCAGGCTAGAGGCTCTCTACTTGCTTTCTTTATTTCAGTCCTTTCCTTCATAACCCTCATTGGTGGAATGCCTCCACTTTTGGAAGAAATGAAGGTATTTAAACGAGAGAGGTTGAATGGACACTATGGTGTTACTGCTTTTCTGATTGGCAACACATTATGTGCTATACCCTACATGCTACTAATGTCTGTGATACCTACTCTTATAGTTTACTATCTTTCTGGTCTACACAAGGGATTTGGACACTTTCTGTACTTAGTTTCTGTGGTATTTGCCACAATTATGTCTATTGAGAGCTTAATGCTGGTTGTTGGGAGTATCTTCCCTAATTTCATAATGGGGATGATCATTGTTGGTGGAATTCAAGGGATCATGATCTTAATTGGTGGATTCTATAGATTGCCTCATGATCTCCCAAAGCTTGTTTGGAGATACCCTTTGTATTATCTTTCATTCCACAAGTATGCTTTCCAAGGATTGTTCAAGAATGAATTTGAAGGTTTAACATTTGTGTTTGATGATGAAGATGGAAGAACAAGAAGTAGCAGAACTGTGAGTGGTAGGGAAATTCTGAGAAACATATGGCAAGTTGAAATGGGTCATTCTAAGTGGGTTGATCTTGTTATCTTGTTTGGAATGATTGTGCTGTATCGATTTATGTTTTTGGCCATTACTAGGAGCAAAGAGAAGGTCCATAGACAAGTGGCTGGTTGA 1941 0.3926 MSGDELLQTKAKLDNLVVMKPNTEKSRGIEREEGIFMTWEDLLVTVAGSGKRRKPILKGLTGFAKPAQLLAIMGPSGSGKTTLLDALAGRLSSNTKQTGNILINGHKQALAYGTSAYVTHDDALLSTLTAKEALYYSCQLQLPDSMSMKEKKERADSTLREMGLQDAIDTRIGGWTSKGLSSGQKRRLSICIEILTRPKLLFLDEPTSGLDSAASYYVMSRIASLNLRDGIQRTIVAAIHQPRSEVFQLFHNLCLLSSGETVYFGLASAATEFFASNGFPCPSLYNPSDHFLRIINKDFEQDAEEGFGKGVNTEEAINILVKSYMSSKIGKQTQKQVEEIIDSNSNGIEKKKRRINAGYFTQCLIITRRSSIHMFRDLSNFWLRLTVYAVIALSLGTIYYDIGSSIGSIQARGSLLAFFISVLSFITLIGGMPPLLEEMKVFKRERLNGHYGVTAFLIGNTLCAIPYMLLMSVIPTLIVYYLSGLHKGFGHFLYLVSVVFATIMSIESLMLVVGSIFPNFIMGMIIVGGIQGIMILIGGFYRLPHDLPKLVWRYPLYYLSFHKYAFQGLFKNEFEGLTFVFDDEDGRTRSSRTVSGREILRNIWQVEMGHSKWVDLVILFGMIVLYRFMFLAITRSKEKVHRQVAG 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0977 646 Pfam ABC-2 type transporter 240 297 IPR043926 GO:0140359
Alju03g0977 646 Pfam ABC-2 type transporter 361 574 IPR013525 GO:0016020|GO:0140359
Alju03g0977 646 ProSitePatterns ABC transporters family signature. 180 194 IPR017871 GO:0005524|GO:0016887
Alju03g0977 646 Gene3D - 40 275 IPR027417 -
Alju03g0977 646 SMART AAA_5 66 255 IPR003593 GO:0016887
Alju03g0977 646 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 26 643 - -
Alju03g0977 646 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 283 IPR003439 GO:0005524
Alju03g0977 646 FunFam ABC transporter G family member 11 35 323 - -
Alju03g0977 646 Pfam ABC transporter 63 208 IPR003439 GO:0005524
Alju03g0977 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 271 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0977 Alju-ChrAlju03 37159711 37163280 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0977 54 218 Calmodulin-binding Proteins AT2G36910 30.508 8.82e-09 57.0