Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0972 ATGGTGGACTATTCATGTACTCCTGAAGAAGTGCAGCAGCATTTCCAATCGTGTGGAACAGTAAACAGAGTCACCATTCGTACTGACAAATTTGGCCAACCCAAGGGTTATGCTTATGTGGAGTTCCTTGAGGTAGAGGCTGTTCAGGAGGCACTTCTGCTGAATGAATCTGAACTACATGGGCGTCAGTTGAAGGTAACAGCCAAGAGGACCAACATACCTGGGATGAAGCAGTATCGTGCTCGCCGGTCCAATCCTTATATGGGATTTCGAGGCAGAACCCCATATCCACCTCCTTTTGCCTATTCTCCATATGGATATGGGAAGGTTCCAAGGTTCAGAATGCCAATGCGTTATAGCCCATACTATTGA 372 0.4677 MVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRARRSNPYMGFRGRTPYPPPFAYSPYGYGKVPRFRMPMRYSPYY 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0972 123 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 65 IPR000504 GO:0003723
Alju03g0972 123 Gene3D - 1 75 IPR012677 -
Alju03g0972 123 SUPERFAMILY RNA-binding domain, RBD 3 94 IPR035979 GO:0003676
Alju03g0972 123 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 71 IPR000504 GO:0003723
Alju03g0972 123 SMART rrm1_1 2 67 IPR000504 GO:0003723
Alju03g0972 123 CDD RRM_II_PABPs 2 67 - -
Alju03g0972 123 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 2 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0972 Alju-ChrAlju03 37028360 37029887 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0972 2 67 Eukaryotic Initiation Factors Gene Family AT2G36660 31.343 7.23e-06 42.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g0972 03 37028360 37029887 Alju03g0972 03 37028360 37029887 CCT