Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0923 ATGCTTCCCTGTTGCTATCGGTTTGTTGTTGCGTGTGAGAAAATGCCTGTTATGAAATCAAAACCTAGTTATTTTTGCTATGCATGTTTCAGATTGATGTTGGAAACTGATACTTGTAATAATGAAGACGATTTGGGGAGTAGAGACTCATCAATCCGTCATTTCTTCTGGTTTTCCTGTGTCGATCGCTACCGCCGGGGGGTGATAATGGCCACAGTCGCCACTACTGCTCCACCGTCAGCTCCGCCTCCACAAGCCCTAAAATTAGAGTCCCTTGCTCGCATAGACACCACCACACTCTCCCAGTCCGAGCTCCAAGCTCTCTCCCTCTGCTCACTCTCCGCCTTCGACCTCACCTGCACCACCAACCTCGTTTTCCCCCATGTCGACCGTTCACTCTTCAATGAGAGCGCTGGCTCTCGCCGCCAGACCTACTCCCGACCACGCAAACCCCTTTCCCCTACTGACTCCCCCACCGGCCACCGCCGCCGCGTCGCCGGTCTTCTTCCAACTCCAAAGCTCCCTCCTGTCCCCGATGACGACCCGGAAAACTTAGAGAACCGCAAGATTATAGATTATTTGAAGCAATTGATCAGGGAAGACCCTAAATTCGATCAAGTTGAGCTAGCCCCACCTTCTGTTAGCCACGAAGTTGTGCCGAATTTTGAATTAAGGGTTGGGATGGGGGAGAGCGAGGATATGGGGCTGGTGAGGAAGAGGAAGAGGGGCAGGAAACCCAAAGTGAAGGCACATTTGAAGGAGTGCTATAGAGAGATGGATATTGTGAATAACGGTGGCGTTGCGATTGATCTTTCTGCTTTGGCGAATACGGAGGATCCATTTTCTGATGAGTTGAGGAGAAGGACTGAGGGGTTGCAGAGTGAAGAAGAGCTATTGGGGTTTTTGAGGGATTTGGGGGGACAATGGGGAAGTAGGAGGAAGAAGAGGAAGATTGTGGATGCCGGAGATTTTGGCGATGTACTTCCGGTTGGTTGGAAGCTTCTACTGGGTTTGAAGAGAAAAGATGGTCACGCTTGGATTTATTGCCGCAGATACATCAGTCCTAGTGGAGAACAATTTGTATCTTGTAAAGAGGTTTCTTCGTATCTTCAGTCCCTTTTTAGTCACAATGATGCCCAATTGCCAATCACTCATGGGGTTGAAAATATGCTGATGGACAATAGGGTGACTACTCAAAGTTTTGCAGGTGTTACCCCTGAGGAGCAGGATAGACGGATGATCATTGCAAATGACTCAGCTCCACCCAGTTCTTCTGAATGTAATGATCGATCAAAGGATGTGGCCTTACTGGGAATTGAGAATCTTGCAGATGTTCAAATACATGACGTATTTGAATGTCACAAATGTAGCATGACATTTGATGAGAAGGATTCATACTTGCAGCACCTTTTGTCCTTCCACCAAAGGACAACAAGGCGCTATCGACTTGGTTCTTCTGTTGGAGATGGAGTTATAATCAAAGATGGAAAATTTGAGTGCCAGTTCTGTCATAAGGTGTTTCTTGAAAGGCGTCGCTACAATGGACATGTGGGGATCCATGTTAGGAACTATGTGAGGAAAGTTGAGGAATCACCAAGTCAGGTAAATGTTAAAAGGAGAGATAAGTCTCCGATCAGGGAGGATTTTCCTTCAAGGATCTCTAAGATGGATGCGCTAATTGAAATTGCTCAGAACTCTATTATGGAGAATTCTGCAATTGAACCCCTTGGTAACCATGATAAACTGAATGTAATTTCTACTACAGAAATTGCTGTTGGTAACTTAGATCATGACAACATTATTGAGTCTCCTCTCAGTGATCAGCAAATGGAAGATAGCATCAACTACGAAAAAGTCGATCACAATTTGAATCACCAAGGTAGTCAACTTGCAGTCATGGATGAAGAAGTAGAGAAAACTGATGGCGGCAACAAAATTATAGATTCTAAGATAGAGACCTGTGAGGATCCCATTGGTTTGTCAACTGTAAACGACCAAAATGCTGATGCATTTGGGAATTCAAAGATAAAAGATGATGTGGTAATGGCTTTTGATGGTTTGGATCAGTCCAGTGTTGATTTGGAAGGAGTTTCACGAAGCCCTTTACTTACTTTATCTGGCAAAGGTATGACCCCTGAAGTTGAAAATAATCGAAGTTCTGGTGGTACTGTTACTGTAGAGCAACTTAACCATGAGGGAGATAGTAGAATTAGGAATGAGTTCAAAGTTGAATTAGATGACACAAAAGATGTATCTGTTATGCCTAAAATCCAAGAGACAAGATTGCCAACCTCTGAAGAGAATACAATGTCATCTGAGGTGCCAACCCCATCTATGTCCATGGTACAGTCTTTGGATTACTTTTCCCATCTCACTGGACTCTCAGATAAGGGTGAAAAGAAAAACCAATATTGCCGTGTTGAGCACAAATATGATGACGTGAATGGATCCCGGGAATTGAGGATTGATGAAACAGAAACTGCAAAATGTGATTTTTCAATTGGTCAGCCTTCTCTTTCTCTGCCCCAGGTGTCAACAGTTTCGGCAAACAAGACACAGATGGAAGAAGAAGAAGAAGAAGGGGCTGCTTGTGCTTCCTCAGATCAGGTTCAATCTCAAGAAGCAGGAAGACATCAGATCACAACATTATGTGTATGGTGTGGTGTAGAGTTTGATTATGATGCTGTTGATTCTGAAATACAACCAGATTCTGTTGGATTCATGTGCCCGGCTTGTAAGGCCAAAATATCTGGTCAAATCGATGTGCTTGACAGTGGATCACCCTTGAACTCTGACCATATTTGA 2805 0.4439 MLPCCYRFVVACEKMPVMKSKPSYFCYACFRLMLETDTCNNEDDLGSRDSSIRHFFWFSCVDRYRRGVIMATVATTAPPSAPPPQALKLESLARIDTTTLSQSELQALSLCSLSAFDLTCTTNLVFPHVDRSLFNESAGSRRQTYSRPRKPLSPTDSPTGHRRRVAGLLPTPKLPPVPDDDPENLENRKIIDYLKQLIREDPKFDQVELAPPSVSHEVVPNFELRVGMGESEDMGLVRKRKRGRKPKVKAHLKECYREMDIVNNGGVAIDLSALANTEDPFSDELRRRTEGLQSEEELLGFLRDLGGQWGSRRKKRKIVDAGDFGDVLPVGWKLLLGLKRKDGHAWIYCRRYISPSGEQFVSCKEVSSYLQSLFSHNDAQLPITHGVENMLMDNRVTTQSFAGVTPEEQDRRMIIANDSAPPSSSECNDRSKDVALLGIENLADVQIHDVFECHKCSMTFDEKDSYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFLERRRYNGHVGIHVRNYVRKVEESPSQVNVKRRDKSPIREDFPSRISKMDALIEIAQNSIMENSAIEPLGNHDKLNVISTTEIAVGNLDHDNIIESPLSDQQMEDSINYEKVDHNLNHQGSQLAVMDEEVEKTDGGNKIIDSKIETCEDPIGLSTVNDQNADAFGNSKIKDDVVMAFDGLDQSSVDLEGVSRSPLLTLSGKGMTPEVENNRSSGGTVTVEQLNHEGDSRIRNEFKVELDDTKDVSVMPKIQETRLPTSEENTMSSEVPTPSMSMVQSLDYFSHLTGLSDKGEKKNQYCRVEHKYDDVNGSRELRIDETETAKCDFSIGQPSLSLPQVSTVSANKTQMEEEEEEGAACASSDQVQSQEAGRHQITTLCVWCGVEFDYDAVDSEIQPDSVGFMCPACKAKISGQIDVLDSGSPLNSDHI 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0923 934 ProSitePatterns Zinc finger C2H2 type domain signature. 453 474 IPR013087 -
Alju03g0923 934 Gene3D Classic Zinc Finger 428 526 - -
Alju03g0923 934 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 70 681 IPR037472 -
Alju03g0923 934 SMART c2h2final6 498 520 IPR013087 -
Alju03g0923 934 SMART c2h2final6 451 474 IPR013087 -
Alju03g0923 934 ProSiteProfiles Zinc finger C2H2 type domain profile. 451 479 IPR013087 -
Alju03g0923 934 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 318 390 IPR001739 GO:0003677
Alju03g0923 934 SUPERFAMILY DNA-binding domain 326 376 IPR016177 GO:0003677
Alju03g0923 934 MobiDBLite consensus disorder prediction 137 184 - -
Alju03g0923 934 ProSiteProfiles Zinc finger C2H2 type domain profile. 498 525 IPR013087 -
Alju03g0923 934 MobiDBLite consensus disorder prediction 137 153 - -
Alju03g0923 934 ProSitePatterns Zinc finger C2H2 type domain signature. 500 520 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0923 Alju-ChrAlju03 36221278 36228211 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju03g0923 None None None