Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0916 ATGAAGACGAAGGAGAAGGAGGTGCTTCAGACTTCAGAGGATACATTTGCCGCCTACGAGGACACGTGGCGGCATATCACCGCTCTTCGGAGGCTAAAGCCTATCAAATACAATTCAATTCTCATCGCTTTCTACCTTGAAGACCAATCGAATTGGCTACATAATTCCTGCGCTGATATTTTCCCTCATTCAACTGGGAAATTCCCGGACTTACGTACGCACGGAGAAGGTGAGGTGGGACTGACTTGTATGGATAATCTTTGCTGCTTCAACTCTGTCTCTAAGGCTGTTGGAGGACGTTCTTCATGTAGCTCTGGCAAGGGCAGAAGCCATCAATTCCCAGTCAAGTATGGCTTTTGCCTTGTTAAAGGGAAAGCAAGCCACCCAATGGAGGACTATCATGTAGCAAAACTTGTCCAGTACAGAGGACAAGAGGTTGGGCTGTTTGCTGTATATGATGGGCACTTGGGAGACAGTGTACCAGCCTATCTGCAAAAGCATCTCTTTTCTAATATATTAAAAGATGAGGACTTCTGGACTGATCCGAACAGGTCAATTATCAAAGCCTATGAGACAACAGATCAGGCAATTCTCTCTCACAGCGCTGATTTGGGGCGAGGTGGATCTACTGCAGTGACTGCAATTCTTTTAAATAATCAGAAATTATGGATAGCTAATGTTGGAGATTCACGAGCAGTTATGTCAAGGGGAGGGTCGGCTATACAGATGAGTATTGATCATGAGCCTAACAGTGAAAGGGACAGTATTGAGGACAGAGGTGGCTTTGTCTCAAACTTGCCAGGAGATGTTGCAAGAGTGAATGGCCAACTTGCAGTTTCTCGGGCATTCGGAGACAAAAACCTAAAATCACACTTGCGATCTGACCCCGACATACGGCATGTTGATATTTATCCAGATTCTGAGCTTTTGATTCTCGCAAGTGATGGCCTATGGAAGGTTATGGCAAATCAAGAGGCAGTTGATGTTGCAAGAAAGACTAAGGATCCACAAAAGGCAGCGAAACAACTAGTTGCCGAGGCATTGAAGAGAGAGAGCAAAGACGATATTTCCTGCATTGTTGTTCGTTTCAAGGGATGA 1098 0.4517 MKTKEKEVLQTSEDTFAAYEDTWRHITALRRLKPIKYNSILIAFYLEDQSNWLHNSCADIFPHSTGKFPDLRTHGEGEVGLTCMDNLCCFNSVSKAVGGRSSCSSGKGRSHQFPVKYGFCLVKGKASHPMEDYHVAKLVQYRGQEVGLFAVYDGHLGDSVPAYLQKHLFSNILKDEDFWTDPNRSIIKAYETTDQAILSHSADLGRGGSTAVTAILLNNQKLWIANVGDSRAVMSRGGSAIQMSIDHEPNSERDSIEDRGGFVSNLPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDIRHVDIYPDSELLILASDGLWKVMANQEAVDVARKTKDPQKAAKQLVAEALKRESKDDISCIVVRFKG 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0916 365 ProSiteProfiles PPM-type phosphatase domain profile. 116 363 IPR001932 -
Alju03g0916 365 SUPERFAMILY PP2C-like 109 364 IPR036457 -
Alju03g0916 365 SMART PP2C_4 108 361 IPR001932 -
Alju03g0916 365 Pfam Protein phosphatase 2C 125 356 IPR001932 -
Alju03g0916 365 Gene3D - 112 365 IPR036457 -
Alju03g0916 365 PANTHER PROTEIN PHOSPHATASE 101 363 IPR015655 GO:0004722|GO:0006470
Alju03g0916 365 CDD PP2Cc 115 363 IPR001932 -
Alju03g0916 365 FunFam Probable protein phosphatase 2C 39 106 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0916 Alju-ChrAlju03 36134906 36145555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0916 84 364 PP2C-type Phosphatase Gene Family AT1G22280 70.035 7.26e-145 410
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g0916 03 36134906 36145555 Alju03g0916 03 36134906 36145555 CCT
Alju03g0916 03 36134906 36145555 Alju03g0916 03 36134906 36145555 ECH