Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0914 ATGGCGGAGCGTGATTCTTACGGGCTGGGTCCTCGATTAGATATACAGCAATTACAATTTGAAGCCCAGCATCGATGGTTGCGGCCTTCTGAAATTTGTGAAATTCTTCGTAATTATCAGATGTTTCAAATCACATCAGAACCTCCAAACATGCCACCGAGTGGTTCACTTTTTCTTTTTGATAGGAAGGTATTGAGGTATTTTAGAAAGGATGGACATAATTGGAGAAAGAAAAAGGATGGAAAGACTGTGAAGGAGGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTATTACATTGCTACTATGCTCATGGAGAAGAAAATGAAAATTTCCAGAGGCGAAGCTATTGGTTGCTTGAACCGGATATGATGCATATTGTTTTCGTCCACTATTTGGAAGTTAAGGGTCATAAGACAAGTGTTGGAGCAAAACCAGATATTGATGAAGTTTCATCAGATTCCCAAAGAGTCAGCTCTGCATCATCTGGGTTTTCGAGAAATTATAATACTGTGCCTTCAAGAAGTACAGATTCTGTGAGCCCAACTAGCACTTTGACATCCTTATGTGAAGATGCTGACTCTGGTGATCGTGCACAGCCACTGATTTCTGGAGCAGACTATATTTCTCTTGTTCAGCGAGATAAACCTAGAGGCAGTGATGCTAGTACTTCTTTCATTGATAGTCAAAAAACAAATGGAATGGCCTTACAGGACAATGGCTTTGGACAATGTACAAATGGATTATCTACTGATCCTTCCCTTGTTCCATTTACTTCCATCCCATCCAATTCAATAGGAAACATGCTTGAACCAGAAAATACTATTCCAGGTGATCTTTTAGCCATAAAAAATGTCCTCACTGGGCCAGCTGGGAGTTCTCAGTCCCTCCAATCAAATTGGCAGATACCGTTTGGAGGTAATCCAGGACAGATGTCCAGAGAGCTTACAACCCAATCGCTTGGTTTGGAATTTGGATCTGATTTTAGCAATGGTTTGCTGGAACATGAAACAAACAATCATATTGCTTCTGGCTCGGCAACTTTTAACTGTCAGCGTGGAGAGGAGCCTGTGCGGGAAAACTTTCCAGAGCAGCATACAGATACTCAATCTCAAAATTTTCTGAAATACAATTTTGGGAAGGAAGCTCCCCCAGAAGAAAGCATTAATTATGCCTTGACTGTGAAGCGGTCCTTGTTAGATGGGGAAGAAAGCCTAAAGAAAGTTGACAGCTTCTCTCGATGGATCACTAAAGAACTTGAAGAGGTGGATGATCTTCATATGCAGTCATCACCTGGCATCTCTTGGAGCGCTGATGAATGTGGGCATGTGATAGATGACTCCTCATTGAGCCCCTCTCTCTCTCAGGACCAGCTGTTTAGCATAAATGATTTTTCACCTAACTGGGCATATGCTGAATCAGAAACAAAGGTTCTGATCATTGGAACATTTTTGAGGAGTCAAACAGAGGTAGCGAATTATAACTGGTCGTGCATGTTTGGGGAAGTTGAGGTTCCTGCTGAGGTTCTAGCCAGTGGAATTCTGTGCTGTCCGGCTCCACCTCTCAAGGTTGGACGGGTTCCCTTCTATGTAACATGCTCCAATAGGTTGGCTTGCAGTGAAGTGCGGGAATTTGATTACGCAGAGAGCTTTGGTGAAAATGTTGATGTTTCAGATTTCTATATCAGTTCAACTGAGATACAGCTTCATCTGAGACTAGAGAAGCTACTTTCTTCAAAATCTGCGCTCTCTTCTAATTACAGCTTTGACAATGATATGGCGAAAAGAAACTTAATGTTTAAGCTCATTACGCTAAAGGAGGAAGACGCAGTCTCAGACAGGGAAGAGCTGATGTCAGAGAAGAATGCTTCCCAGCAAAAGGTGAAGGAGTTAATATTTTACAGGCAAGTTAAGGAGAAGCTGTACTCTTGGCTTCTTCGCAAAGTAATTGAAAATGGTAAAGGGCCAAATGTTTTGGATGAAGAGGGGCAAGGTGTGCTTCATTTAGCAGCTGCTCTTGGTTATGATTGGGCAATAATGCCAATCGTTATTGCTGGAGTAAATATCAATTATCGGGACGTGAATGGATGGACAGCTCTGCACTGGGCTGCATCCTATGGCAGGGAACGAACAGTTGCTGTACTTGTCTCCATGGACGCAGCTGCTGGAGCATTGACAGATCCATCCCCAACGTTTCCCTCTGGTAGAACAGCAGCAGATCTTGCTTCTAGCAATGGGCACAAAGGAATCTCTGGTTTCCTTGCAGAGTCATCATTAACCAGCCACCTTTCAACCCTCACAATGACTGATCAGAAGGGAGATGTTGTGCAAAGAGCAGCTTCAGAAGTAGAAGAAGTACAGACAGTTTCAAAACGAATTGCAACACCAGGGTTTAGCGGTGATATGCCAGATGCCCTCTGCCTTAAGGATTCCCTTACTGCTGTTCGTAATGCTACACAGGCGGCTGATCGTATATACCAAGTATTCAGAATGCAGTCATTTCAGAGGAAGCAGTTGACCCAGCTTGAAGATGATGAGTTTGGATTGTCAGATCAGCAAGCTCTTTCCCTCGTAGCTTCTAAGGCATGCAAGGCTGGATATGGGGATGATTTAGCCCATACTGCTGCTGTACAAATACAGAAAAAGTTTCGTGGTTGGAAGAAAAGAAAAGAATTTCTAATAATTCGTCAAAGAATTGTTAAAATTCAGGCCCATGTAAGAGGTCACCAGGTAAGGAAGAAGCAAAAATCAGTCCTCTGGTCTGTAGGAATTTTGGAGAAGGTAATATTGCGATGGAGACGCAAGGGCAGTGGTTTACGTGGCTTCCGACCAGATGCTAATAAAATTCCAAACCAAGAAAATGATACTGTGAAAGAGGATGATTACGATGTTCTCAAGGAAGGGAGAAAACAAAGTGAAGAAAGGTTCCAAAAGGCGCTTTCAAGGGTGAAGTCTATGGTTCAGTATCCAGAGGCACGGGCTCAGTACCGGCGTCTGCTAAATGTTGTTGAGGACTTTCGGCAAACAAAGGCATGTGATATGGATGTGATCAATTCAGAAGAGACAGTCGATGGTGTAGAGGACCTTATTGACATTAACATGCTCTTAGATGATGACAATTTCATACCCATAGCATTTGATTGA 3144 0.4288 MAERDSYGLGPRLDIQQLQFEAQHRWLRPSEICEILRNYQMFQITSEPPNMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWLLEPDMMHIVFVHYLEVKGHKTSVGAKPDIDEVSSDSQRVSSASSGFSRNYNTVPSRSTDSVSPTSTLTSLCEDADSGDRAQPLISGADYISLVQRDKPRGSDASTSFIDSQKTNGMALQDNGFGQCTNGLSTDPSLVPFTSIPSNSIGNMLEPENTIPGDLLAIKNVLTGPAGSSQSLQSNWQIPFGGNPGQMSRELTTQSLGLEFGSDFSNGLLEHETNNHIASGSATFNCQRGEEPVRENFPEQHTDTQSQNFLKYNFGKEAPPEESINYALTVKRSLLDGEESLKKVDSFSRWITKELEEVDDLHMQSSPGISWSADECGHVIDDSSLSPSLSQDQLFSINDFSPNWAYAESETKVLIIGTFLRSQTEVANYNWSCMFGEVEVPAEVLASGILCCPAPPLKVGRVPFYVTCSNRLACSEVREFDYAESFGENVDVSDFYISSTEIQLHLRLEKLLSSKSALSSNYSFDNDMAKRNLMFKLITLKEEDAVSDREELMSEKNASQQKVKELIFYRQVKEKLYSWLLRKVIENGKGPNVLDEEGQGVLHLAAALGYDWAIMPIVIAGVNINYRDVNGWTALHWAASYGRERTVAVLVSMDAAAGALTDPSPTFPSGRTAADLASSNGHKGISGFLAESSLTSHLSTLTMTDQKGDVVQRAASEVEEVQTVSKRIATPGFSGDMPDALCLKDSLTAVRNATQAADRIYQVFRMQSFQRKQLTQLEDDEFGLSDQQALSLVASKACKAGYGDDLAHTAAVQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKKQKSVLWSVGILEKVILRWRRKGSGLRGFRPDANKIPNQENDTVKEDDYDVLKEGRKQSEERFQKALSRVKSMVQYPEARAQYRRLLNVVEDFRQTKACDMDVINSEETVDGVEDLIDINMLLDDDNFIPIAFD 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0914 1047 MobiDBLite consensus disorder prediction 153 191 - -
Alju03g0914 1047 FunFam Calmodulin-binding transcription activator 2 455 551 - -
Alju03g0914 1047 Gene3D Immunoglobulins 455 551 IPR013783 -
Alju03g0914 1047 Pfam IQ calmodulin-binding motif 874 892 IPR000048 GO:0005515
Alju03g0914 1047 Pfam IQ calmodulin-binding motif 897 914 IPR000048 GO:0005515
Alju03g0914 1047 Gene3D - 870 918 - -
Alju03g0914 1047 ProSiteProfiles Ankyrin repeat region circular profile. 695 720 - -
Alju03g0914 1047 ProSiteProfiles Ankyrin repeat profile. 695 727 IPR002110 GO:0005515
Alju03g0914 1047 SUPERFAMILY Ankyrin repeat 645 756 IPR036770 -
Alju03g0914 1047 SMART ANK_2a 695 724 IPR002110 GO:0005515
Alju03g0914 1047 SMART ANK_2a 662 691 IPR002110 GO:0005515
Alju03g0914 1047 SMART ANK_2a 734 763 IPR002110 GO:0005515
Alju03g0914 1047 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 869 921 IPR027417 -
Alju03g0914 1047 Gene3D - 619 766 IPR036770 -
Alju03g0914 1047 ProSiteProfiles IQ motif profile. 895 919 IPR000048 GO:0005515
Alju03g0914 1047 SUPERFAMILY E set domains 462 547 IPR014756 -
Alju03g0914 1047 SMART CG_1_2 18 136 IPR005559 GO:0003677
Alju03g0914 1047 SMART iq_5 894 916 IPR000048 GO:0005515
Alju03g0914 1047 SMART iq_5 871 893 IPR000048 GO:0005515
Alju03g0914 1047 FunFam Calmodulin-binding transcription activator 2 871 919 - -
Alju03g0914 1047 Pfam IPT/TIG domain 462 540 IPR002909 -
Alju03g0914 1047 Pfam Ankyrin repeats (3 copies) 667 757 IPR002110 GO:0005515
Alju03g0914 1047 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1009 - -
Alju03g0914 1047 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Alju03g0914 1047 MobiDBLite consensus disorder prediction 144 193 - -
Alju03g0914 1047 ProSiteProfiles IQ motif profile. 872 901 IPR000048 GO:0005515
Alju03g0914 1047 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0914 Alju-ChrAlju03 36110544 36125790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0914 1 1028 CAMTA Transcription Factor Family AT5G64220 51.974 0.0 1016
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Alju03g0914 CG-1 8.4e-51 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g0914 03 36110544 36125790 Alju03g0914 03 36110544 36125790 CCT