Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0912 ATGGATAGAATAGTGGTGACTATAGGCGGAGAAGAACGTCCTGCAACGGCAATGGATTCCACGCATATGGCGCTCTTCAGAGCTTTGAATCGCCATTTCTGCAGAGCTCCTTCTAGTCAATGCATTCCCACGGTTCTTCTCCGTCACAGGCTTAAGTGCCTTTCTCATAACCATGCTATGCGCAACTCCAGCTCTTTTGCTTCTTCTTCACTCCCGCTCAGGAGCTTGTGTGCGGTGGTCACCCGGCTGCCCTGGCGTTTCCGGTGTGTTTCCAGCTCCGCTGCTCCGTTTGCTTCTTCTGGCGCTGGAAATGGCGGGCTTGGAGGGGTGAGTGGTGGTGGTGGAGGAGGAGGAGGAGGAGATGGCTCCGGCGGTGATTCTGGTGATGTCAATCTCAAATTGGTTGGTGATGGTGGCAAAGAACTTTCGGCACTTTCGCCTGATGTTATTATTCTCGATGTTGCGGGAATGGTGTGTGGTGGTTGTGCTGCTAATGTGAAAAGAATTCTTGAAAGTCGACCTCAAGTGTCATATGCTACTGTAAATCTAACAACAGAGACAGCAATAGTTTGGCCTGTATCTGAAGCAAAAACTGTACCAAATTGGCAAAAGCAATTAGGAGAAGCACTTGCAGAACATTTGAGTAGCTGTGGTTTCAAGTCTAGCCTTCGGGATTCAGCAAGAGACAGTTTCCTCCAAGTTTTTGAAAGGAAGATGGAGGAAAAGCACAAACAGTTGAAAGAAAGCGGGCGAGAGTTAGCTGTTTCCTGGGCTCTATGTGCTGTCTGCCTTGTTGGCCATCTTTCTCATTTCCTTGGAGCGAAGGCACCTTGGATCCATGCATTTCATTCCACTGGGTTTCACCTGTCCCTGTCTTTGTTTACATTGGTTGGTCCAGGGCGTCAACTTATTCTTGATGGCATAAGAAGCCTTCTTAAAAATGCACCGAACATGAACACATTAGTTGGTCTTGGAGCTTTGTCATCATTCTCCGTCAGCCTATTTGCTGTCTTGCTGCCCAACTTGGGCTGGAAGGCTTTCTTTGAGGAACCAATTATGCTAATTGCATTTGTCTTGTTAGGAAGGAATCTAGAACAGAGAGCCAAAATCAAAGCAACCAGTGATATGACTGGACTTCTTAGTATATTGCCATCAAAAGCTCGACTTCTGGTTAGCAATGACACTAAGGAGTTTGACTCAAGTGTTGAAGTTCCTTCTGACAGTCTTTCTGTTGGAGATCGAATTCTTGTGCTTCCTGGAGATCGTATTCCCGCAGATGGAATTGTCAGAACTGGTAGAAGCACTGTAGATGAGTCAAGTTTTACTGGAGAGCCTTTGCCAGCAACAAAACTACCTGGGAATCAGGTTGCTGCTGGGAGTATAAATCTAAATGGCACTCTTACAATTGAAGTGCAGAGACCAGGCAATGAGACTGCCATGGGAGACATCGTTCGTCTGGTTGAAGAAGCACAGAGTAGGGAAGCTCCAGTTCAACGTTTGGCTGACAAGGTGGCTGGACACTTCACTTATGGAGTAATGGCTGCTTCTGCAGCCACATTTACATTCTGGAGTCTGTTTGGCACACGCATTCTACCTGCTGCTCTTTATCAAGGAAGTGCAGTTTCTCTGGCATTGCAACTTGCTTGCAGTGTTCTGGTTGTTGCTTGTCCATGTGCACTTGGGTTGGCCACACCTACAGCTGTGCTGGTTGGAACTTCTTTAGGAGCTACAAGAGGATTACTTTTACGGGGTGGAAACATTCTGGAGAAGTTTTCAATGGTAGATGCTATCGTATTTGACAAAACAGGGACCCTGACGATTGGTAGACCTGTTGTGACCAAGATTGTCAATACAAGCGGACAAAACAAAAACTTAAGGCAAACTGCAGACAATGATTGGTCAGACATCGAAGTTCTGAGATTAGCTGCTGGAGTAGAATCAAATACAGTACATCCAGTTGGTAAAGCAATTGTAGAAGCTGCTCAGGCAGTTAATTGTCACAATGCAAAGGCAGCAGATGGAACATTTTTGGAAGAACCTGGATCTGGTGCAGTCGCAATTATTAATAACAATAAGGTTTCAGTTGGGACTTTGGAATGGCTCACCAGGCAGGGAGTTAACAAAAATATTGATCAAGAAGTTGAGGACTATAGAAATCAGTCTGTTGTTTATGTGGGAGTAAATGATACTGTAGCTGGCCTCGTATATTTTGAAGATCAGATAAGGGAAGATGCAAGACATGTTGTTGAAGCTTTGTCTAAACAAGGAATTGGTGTTTATATGCTCTCCGGAGACAAAAGGAGTACGGCTGAGTATGTTGCATCTGTTGTTGGAATCCCTAGAGAGAAGGTACTATCTGGAGTGAAGCCAGATGGCAAAAAGAAGTTTATAAGTGAACTCCAGAAAGATCAGCAAGTTGTTGCTATGGTTGGCGATGGGATCAATGATGCAGCTGCCTTGGCTTCGTCACATATTGGTATTGCATTAGGTGGGGGTGTTGGAGCTGCTAGTGAGGTGTCTTCCATTGTACTGATGAGCAACAGACTCTCGCAGCTGCTTGATGCGTTGGATCTTAGCAGGCTAACCATGAAGACTGTGAAACAAAATCTTGGGTGGGCTTTCCTATACAATATTGTTGGAATCCCAATTGCAGCTGGATTGTTACTTCCAGTAAGTGGGACCATGTTAACTCCATCAATTGCAGGGGCTCTCATGGGCTTGAGTTCCATTGGGGTAATGACAAACTCATTGCTTCTAAGATACAGATTTTCCACAAAGCAAAAACAAATCCAGGAAGCATCCCCAATGATCAAAACCCATGCAGATGGTGATCTTACCCAAAAAGAGAAATTGAAATATGGACATTAA 2868 0.4508 MDRIVVTIGGEERPATAMDSTHMALFRALNRHFCRAPSSQCIPTVLLRHRLKCLSHNHAMRNSSSFASSSLPLRSLCAVVTRLPWRFRCVSSSAAPFASSGAGNGGLGGVSGGGGGGGGGDGSGGDSGDVNLKLVGDGGKELSALSPDVIILDVAGMVCGGCAANVKRILESRPQVSYATVNLTTETAIVWPVSEAKTVPNWQKQLGEALAEHLSSCGFKSSLRDSARDSFLQVFERKMEEKHKQLKESGRELAVSWALCAVCLVGHLSHFLGAKAPWIHAFHSTGFHLSLSLFTLVGPGRQLILDGIRSLLKNAPNMNTLVGLGALSSFSVSLFAVLLPNLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSILPSKARLLVSNDTKEFDSSVEVPSDSLSVGDRILVLPGDRIPADGIVRTGRSTVDESSFTGEPLPATKLPGNQVAAGSINLNGTLTIEVQRPGNETAMGDIVRLVEEAQSREAPVQRLADKVAGHFTYGVMAASAATFTFWSLFGTRILPAALYQGSAVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGATRGLLLRGGNILEKFSMVDAIVFDKTGTLTIGRPVVTKIVNTSGQNKNLRQTADNDWSDIEVLRLAAGVESNTVHPVGKAIVEAAQAVNCHNAKAADGTFLEEPGSGAVAIINNNKVSVGTLEWLTRQGVNKNIDQEVEDYRNQSVVYVGVNDTVAGLVYFEDQIREDARHVVEALSKQGIGVYMLSGDKRSTAEYVASVVGIPREKVLSGVKPDGKKKFISELQKDQQVVAMVGDGINDAAALASSHIGIALGGGVGAASEVSSIVLMSNRLSQLLDALDLSRLTMKTVKQNLGWAFLYNIVGIPIAAGLLLPVSGTMLTPSIAGALMGLSSIGVMTNSLLLRYRFSTKQKQIQEASPMIKTHADGDLTQKEKLKYGH 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0912 955 Gene3D - 589 860 IPR023214 -
Alju03g0912 955 NCBIfam cadmium family heavy metal-translocating P-type ATPase 350 906 - -
Alju03g0912 955 NCBIfam copper-translocating P-type ATPase 300 920 - -
Alju03g0912 955 FunFam Copper-transporting ATPase PAA1 chloroplastic 609 741 - -
Alju03g0912 955 SFLD p-type atpase 581 860 IPR044492 -
Alju03g0912 955 Gene3D - 609 741 IPR023299 GO:0000166
Alju03g0912 955 ProSitePatterns E1-E2 ATPases phosphorylation site. 600 606 IPR018303 -
Alju03g0912 955 Coils Coil 232 252 - -
Alju03g0912 955 ProSitePatterns Heavy-metal-associated domain. 154 183 IPR017969 GO:0046872
Alju03g0912 955 SFLD Haloacid Dehalogenase 581 860 - -
Alju03g0912 955 SUPERFAMILY Calcium ATPase, transmembrane domain M 350 881 IPR023298 -
Alju03g0912 955 FunFam Copper-transporting ATPase 1, putative 369 491 - -
Alju03g0912 955 PANTHER ATP7, ISOFORM B 146 921 - -
Alju03g0912 955 Pfam Heavy-metal-associated domain 152 220 IPR006121 GO:0046872
Alju03g0912 955 Pfam haloacid dehalogenase-like hydrolase 594 822 - -
Alju03g0912 955 CDD HMA 152 222 IPR006121 GO:0046872
Alju03g0912 955 CDD P-type_ATPase_Cu-like 251 920 - -
Alju03g0912 955 ProSiteProfiles Heavy-metal-associated domain profile. 148 222 IPR006121 GO:0046872
Alju03g0912 955 FunFam Copper-transporting ATPase PAA1 chloroplastic 726 877 - -
Alju03g0912 955 Gene3D - 368 491 - -
Alju03g0912 955 SUPERFAMILY HAD-like 597 916 IPR036412 -
Alju03g0912 955 PRINTS P-type cation-transporting ATPase superfamily signature 833 845 - -
Alju03g0912 955 PRINTS P-type cation-transporting ATPase superfamily signature 437 451 - -
Alju03g0912 955 PRINTS P-type cation-transporting ATPase superfamily signature 598 612 - -
Alju03g0912 955 PRINTS P-type cation-transporting ATPase superfamily signature 733 744 - -
Alju03g0912 955 PRINTS P-type cation-transporting ATPase superfamily signature 810 829 - -
Alju03g0912 955 PRINTS P-type cation-transporting ATPase superfamily signature 755 765 - -
Alju03g0912 955 Pfam E1-E2 ATPase 383 576 - -
Alju03g0912 955 NCBIfam heavy metal translocating P-type ATPase 318 919 IPR027256 GO:0006812|GO:0016020|GO:0019829
Alju03g0912 955 SUPERFAMILY HMA, heavy metal-associated domain 150 199 IPR036163 GO:0046872
Alju03g0912 955 Gene3D - 149 226 - -
Alju03g0912 955 FunFam Copper-transporting ATPase PAA1, chloroplastic 148 223 - -
Alju03g0912 955 SUPERFAMILY Calcium ATPase, transduction domain A 400 487 IPR008250 -
Alju03g0912 955 NCBIfam HAD-IC family P-type ATPase 646 889 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju03g0912 955 NCBIfam HAD-IC family P-type ATPase 400 619 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0912 Alju-ChrAlju03 36062056 36084664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0912 309 931 Primary Pumps ATPases AT1G63440 38.438 3.49e-119 386