Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0899 ATGGCAGGTGCTGCAACATCTGGTGCTTTGTTGAATGGGTTGGGATCTTCCTTCTTGTGTGGAGGAAAGAGAAGCCAATCTCTTTTCTCTGCAAAATCTGTTACTAATAATAATAATGCTGTTAGCCCCAAGAAGTTCATTGTTGCTGCTGCTGCTGCTCAACCCAAGAAATCTTGGGTTCCTGGTGTTAGAGGTGGTGGCAACTTCATTGACCCTGAATGGCTAGATGGCTCGCTCCCAGGTGACTATGGCTTTGACCCTCTTGGCCTAGGCAAGGATCCAGCATTTCTCAAGTGGTACAGAGAGGCAGAGCTCATCCATGGCCGGTGGGCGATGGCGGCGGTTGTTGGAATCTTTGTTGGCCAGGCGTGGAGTGGAGTTCCATGGTTTGAGGCCGGAGCTGACCCGAATGCCATTGCTCCATTCTCATTTGGCTCACTTCTGGGCACACAGTTGCTGCTGATGGGGTGGGTAGAGAGCAAGAGGTGGGTTGATTTCTTCAATCCTGATTCACAGTCAGTGGAGTGGGCTACGCCGTGGTCGAGAACCGCCGAGAATTTTGCCAACGCCACCGGCGAACAGGGATACCCCGGAGGCAAATTCTTTGACCCATTGGGGTTTGCAGGCAAAATCAAAGATGGGGTTTACATTCCTGACACTGAAAAGCTGGAAAGACTCAAACTTGCTGAGATCAAGCATGCTAGGATTGCTATGTTGGCTATGCTCACCTTCTACTTTGAAGCTGGACAAGGAAAGACACCCCTTGGTGCTCTTGGCTTATAA 783 0.5045 MAGAATSGALLNGLGSSFLCGGKRSQSLFSAKSVTNNNNAVSPKKFIVAAAAAQPKKSWVPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGKIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLTFYFEAGQGKTPLGALGL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0899 260 SUPERFAMILY Chlorophyll a-b binding protein 71 260 - -
Alju03g0899 260 Pfam Chlorophyll A-B binding protein 72 248 IPR022796 -
Alju03g0899 260 FunFam Chlorophyll a-b binding protein, chloroplastic 72 259 - -
Alju03g0899 260 Gene3D Chlorophyll a/b binding protein domain 72 259 - -
Alju03g0899 260 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 42 258 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0899 Alju-ChrAlju03 35877249 35878487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0899 5 260 Chloroplast and Mitochondria Gene Families AT1G15820 82.812 3.29e-154 428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g0899 03 35877249 35878487 Alju03g0899 03 35877249 35878487 CCT
Alju03g0899 03 35877249 35878487 Alju03g0899 03 35877249 35878487 ECH