Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0894 ATGAATTTTTCATCTTCAGCTTTATCATCATCATCATGTTCTTCTTCAGTTCTTCAGCTGCCAAACAAATGGTTATCATCATCATCATCAAGGCCTGTGAGGGTTTCTATGATTTCATGTTCTTCTTCAACCACCACCATGTTCATGAATACTGGTAATAAGACCTGCAACTTCTACAAGCTTCTGTCTCTGAGCTCGGTGGCGGCAACCATGACGGAGATCAAGCAGGCTTACCGGTCCATGGCGCTCCGGTACCACCCCGACGTGTGCCGGGACACCGCGGCCATGGAGGAGTGGACCAGGCTGTTTGCGCAGCTTAATGCTGCCTATGAGACTCTGTCCAATCCCCAGCTACGTGAAGAGTATGACTACAATGTTCTTGGATTACGGAGGAGCACGGCGGCGCCGGTGGCGGTGAATGTTGAGAACGGCAATGATGAGATCGGGTTGAAGAAGAGTAGGTGTGAGGACCAGAAGAGAAGATCTAACAGAAGTTCCATGAGAACTCAGAGAATGAAACATCGCTATTGA 531 0.4878 MNFSSSALSSSSCSSSVLQLPNKWLSSSSSRPVRVSMISCSSSTTTMFMNTGNKTCNFYKLLSLSSVAATMTEIKQAYRSMALRYHPDVCRDTAAMEEWTRLFAQLNAAYETLSNPQLREEYDYNVLGLRRSTAAPVAVNVENGNDEIGLKKSRCEDQKRRSNRSSMRTQRMKHRY 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0894 176 SMART dnaj_3 56 118 IPR001623 -
Alju03g0894 176 Pfam DnaJ domain 57 123 IPR001623 -
Alju03g0894 176 CDD DnaJ 57 115 IPR001623 -
Alju03g0894 176 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 16 166 - -
Alju03g0894 176 ProSitePatterns Nt-dnaJ domain signature. 103 122 IPR018253 -
Alju03g0894 176 PRINTS DnaJ domain signature 78 93 IPR001623 -
Alju03g0894 176 PRINTS DnaJ domain signature 60 78 IPR001623 -
Alju03g0894 176 PRINTS DnaJ domain signature 98 118 IPR001623 -
Alju03g0894 176 SUPERFAMILY Chaperone J-domain 54 122 IPR036869 -
Alju03g0894 176 MobiDBLite consensus disorder prediction 154 176 - -
Alju03g0894 176 ProSiteProfiles dnaJ domain profile. 57 126 IPR001623 -
Alju03g0894 176 Gene3D DnaJ domain 43 140 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0894 Alju-ChrAlju03 35776869 35777399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0894 54 123 C2H2 Transcription Factor Family AT1G74250 38.889 1.64e-06 45.4