Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0890 ATGATAGCTGAGGAGAAACTTGCTCTGTTTCAAAGCCACTGGTGGAAGGGCTACAACTTTTCCGAGGACCCTTGTGGCTGGGATGACATATCTTGCAACGATTTCGGAAGCGTTATTTCCATATGGAGATATGATGAACGCAATTCAAAGATAGCAGATCTCAATTTCACTGCGTTTCCCAATCTTGAAGAATTGTATCTTATCGGAACGGGATTGATTGGAGTGCTTTACGTCTCCCTAGATCGGCTAAGTGGAAACGTGCCTTACATTGAGTACCCTATACTTTTGTATGGTACCATTCCAAGTCAAATTGGAGCTCTTCATAATCTCACCAATTTGTACTTATCTTATAACAATCTTAGTGGTACCATTCCAAGACAAATTGAAATTCTTCATAATCTACTTTATGTGGACTGGTCTCATAACAATCTTACTGGTACCATTCCAACTCAAATTGGAGCTCTTCATAATCTCATCAATTTGGACTTATCCTATAACAATCTTAGTGGTACCATTCCAAGACAAATTGAAACTCTTCATAATCTACTTTATGTGGACTTGTCTCATAACAATCTTATTGGTACCATTCCGACTCAAATTGGAGCTCTTCATAATCTCACCAATTTGTACTTATCTTATAACAATCTTAGTGGTACCATTCCAAGTCAAATTGGAACTCTTCATAATCTAATGCATCTGAACTTATCTCATAACAATCTTATTGGTACCATTCCAATTCAAATTGGGGCTCTTCTTAATCTCACTAATTTGGACTTATCTTATAACAATCTTAATGGTACCATTCCAAGACAAATTGAAACTCTTCATATTCTACTTTATGTGGACTTGTCTCATAACAATCTTACTGGCACAGTTCCAACTCAAATAGAAAGTCTTCAACAGCTCACATATCTAAACTTGTCTTGTAACAATATTATTTCAAGTACAATTCCAAATGAGATAGGATCTCTTCAAAGTCTTTCCAATCTAGACTTGTCTTATAACAATCTTATTGGTACAATTCCAAATGAGATAGGAGCTCTTCAAAATCTCGCCAATATAGACTTGTCTTGTAACAATCTTATTGGTGATATCCCATCGTCAATTTCCAATTTGAAAAATTTAGAAGACTTTGATGTTTCTCAAAATCAACTAAGTGGTGGCATGCCTCGACTTTTTGGAAATTTCTTAAATTCTATTAATCTAAATATCTCCCAAAATAATCTGAGTGGAAAAGTGCCCTACATTATCAACGATCATTTTCAATTTCATGGTGACTTTAGTCACAACAAATTCAACGGAATATTACCATCTAGGTTATGCAGTGTTCCATCATTGTGTGGCATTAACTTGAGCTACAATGAAATATCTTATAGTATACCTCGAGATCTTTTTGGGATGGAGTACCTCAACTTGGATGGTAATACAGAATTACTTGGTCTAGAGAAGACACAGGATCCTACTAAAGGTTCAAAGTCTTTGTTGAAAATCTTCATTCCTTCAACAATTTTTCTTGTCATCGTATTTGCAGTGGGTTTCATCTTATTTGATTCTTTCAAAAAGAAAAAGAAATCCATAGCTGAGACAAGAGAAATGAAAAATGGGGATTTGTTTTCCATATGGAATTATGATGGAAAAATTGCATATGAAGACATCATTAGAGCAACAGAGGGCTTTGACATCAAATATTGTATTGGAACTGGTGCCTATGGAAGCGTTTACAGAGCACAACTTCCTAGTGGCAAAATTGTAGCATTGAAAAAACTTCATAGAAGAGAATATGGAAACACATCTTTTGCTAAGAGTTTTCACAATGAAGTACAGATGTTAAGTGAAATTCGACATCGGAATATTATAAAGCTCCATGGATTTTGTTTGCATAATCAATGCATGTTTCTCATATATGAATACATGGAAAGAGGAAGCCTTTTTTATGTCTTGAATAATGATGATGAGGCTAAAGAGTTGGATTGGAGTATGAGGGTGAATACCGTCAAAGGAATAGCAAATTCTTTGTCCTACATGCATCATGATTGTGCTCCTCCAATTATCCATCGAGACGTAACAAGTAATAATGTATTGTTGAACTCAAAGATGGAGGCTTTTCTATCTGACTTTGGCACAGCTAGAATCCTTGATCCAGATTCATCTAATCAAACTCTTCTAGTTGGTACTTATGGTTATGTTGCTCCAGAACTTGCATACACCTTAGTTGTGACTGAAAAATGTGACGTTTATAGTTTTGGAGTGTTGACATTAGAAACATTCATGGGAAGACATCCTAGAGAGTTGATATTGTCATTTTCAAAGACTTGTAGCGAAAGCATTTTGCTGACAGATGTCTTAGACCCACGTCTCCCATTGCCATCATGGAAAGATGCACAAGATGTGACCTTTTTGGTCAAGATAGCATTAGCATGCTTGAATCCATCTCCCAAATCTCGACCATCAATGCAGCAAGTGTCTCAAAGGCTTTTATCCTCCAATCAGCCATTAGCCATTCCTTTCAATAACATCTCACTCCAGCATTTAGTGAATCAAGATATCAAATAA 2553 0.3584 MIAEEKLALFQSHWWKGYNFSEDPCGWDDISCNDFGSVISIWRYDERNSKIADLNFTAFPNLEELYLIGTGLIGVLYVSLDRLSGNVPYIEYPILLYGTIPSQIGALHNLTNLYLSYNNLSGTIPRQIEILHNLLYVDWSHNNLTGTIPTQIGALHNLINLDLSYNNLSGTIPRQIETLHNLLYVDLSHNNLIGTIPTQIGALHNLTNLYLSYNNLSGTIPSQIGTLHNLMHLNLSHNNLIGTIPIQIGALLNLTNLDLSYNNLNGTIPRQIETLHILLYVDLSHNNLTGTVPTQIESLQQLTYLNLSCNNIISSTIPNEIGSLQSLSNLDLSYNNLIGTIPNEIGALQNLANIDLSCNNLIGDIPSSISNLKNLEDFDVSQNQLSGGMPRLFGNFLNSINLNISQNNLSGKVPYIINDHFQFHGDFSHNKFNGILPSRLCSVPSLCGINLSYNEISYSIPRDLFGMEYLNLDGNTELLGLEKTQDPTKGSKSLLKIFIPSTIFLVIVFAVGFILFDSFKKKKKSIAETREMKNGDLFSIWNYDGKIAYEDIIRATEGFDIKYCIGTGAYGSVYRAQLPSGKIVALKKLHRREYGNTSFAKSFHNEVQMLSEIRHRNIIKLHGFCLHNQCMFLIYEYMERGSLFYVLNNDDEAKELDWSMRVNTVKGIANSLSYMHHDCAPPIIHRDVTSNNVLLNSKMEAFLSDFGTARILDPDSSNQTLLVGTYGYVAPELAYTLVVTEKCDVYSFGVLTLETFMGRHPRELILSFSKTCSESILLTDVLDPRLPLPSWKDAQDVTFLVKIALACLNPSPKSRPSMQQVSQRLLSSNQPLAIPFNNISLQHLVNQDIK 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0890 850 Gene3D Ribonuclease Inhibitor 176 254 IPR032675 -
Alju03g0890 850 Gene3D Ribonuclease Inhibitor 4 175 IPR032675 -
Alju03g0890 850 SUPERFAMILY L domain-like 13 291 - -
Alju03g0890 850 FunFam Leucine-rich repeat receptor protein kinase MSP1 521 637 - -
Alju03g0890 850 PANTHER LEUCINE RICH REPEAT KINASE 2 316 830 - -
Alju03g0890 850 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 269 481 - -
Alju03g0890 850 Gene3D Ribonuclease Inhibitor 255 480 IPR032675 -
Alju03g0890 850 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 174 268 - -
Alju03g0890 850 SMART LRR_sd22_2 251 277 - -
Alju03g0890 850 SMART LRR_sd22_2 299 332 - -
Alju03g0890 850 SMART LRR_sd22_2 107 133 - -
Alju03g0890 850 SMART LRR_sd22_2 203 229 - -
Alju03g0890 850 SMART LRR_sd22_2 155 181 - -
Alju03g0890 850 SMART LRR_sd22_2 348 374 - -
Alju03g0890 850 Gene3D Transferase(Phosphotransferase) domain 1 638 834 - -
Alju03g0890 850 Pfam Leucine rich repeat 253 312 IPR001611 GO:0005515
Alju03g0890 850 ProSitePatterns Protein kinases ATP-binding region signature. 565 587 IPR017441 GO:0005524
Alju03g0890 850 SUPERFAMILY RNI-like 220 478 - -
Alju03g0890 850 ProSitePatterns Tyrosine protein kinases specific active-site signature. 683 695 IPR008266 GO:0004672|GO:0006468
Alju03g0890 850 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 89 172 - -
Alju03g0890 850 Pfam Protein kinase domain 563 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g0890 850 ProSiteProfiles Protein kinase domain profile. 559 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g0890 850 Gene3D Phosphorylase Kinase; domain 1 519 637 - -
Alju03g0890 850 PRINTS Leucine-rich repeat signature 254 267 - -
Alju03g0890 850 PRINTS Leucine-rich repeat signature 324 337 - -
Alju03g0890 850 FunFam MDIS1-interacting receptor like kinase 2 638 831 - -
Alju03g0890 850 SMART LRR_typ_2 251 275 IPR003591 -
Alju03g0890 850 SMART LRR_typ_2 299 323 IPR003591 -
Alju03g0890 850 SMART LRR_typ_2 324 348 IPR003591 -
Alju03g0890 850 SMART LRR_typ_2 372 395 IPR003591 -
Alju03g0890 850 SMART LRR_typ_2 107 131 IPR003591 -
Alju03g0890 850 SMART LRR_typ_2 443 467 IPR003591 -
Alju03g0890 850 SMART LRR_typ_2 155 179 IPR003591 -
Alju03g0890 850 SMART LRR_typ_2 203 227 IPR003591 -
Alju03g0890 850 SUPERFAMILY Protein kinase-like (PK-like) 538 825 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0890 Alju-ChrAlju03 35701690 35717088 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0890 61 731 Receptor kinase-like Gene Family AT4G08850 36.132 7.60e-137 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju03g0890 Pkinase 6.1e-45 CL0016