Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0886 ATGAACTTGTCATACAATCATCTCAACAGCTATGTTCCAAGTGAAGGTTATTGCTCTTCTCCTAATTTCATTTTAGATGGAAATGAAGAATTACTTGGTCTAGAGAAAATGCATGGTTCTTCTAAAGAACTTGCATACACCTTAGTTGTGACTGAAAAATGTGATGTTTATAGTTTTGGAGTGTTGACATTAGAAACATTCATGGGAAGACATCCTGGGGAGTTGATATTGTCATTTTCAAAAACCTGTAGCGAAAGCATTTTGCTGACAGATGTCTTAGACCCACGTCTCCCACTGCCATCACGGAAAGATGCACAAGATATGACTTTTTTGGTCAAGATAGCATTAGCATGCTTGAATCCATCTCCCAAATCTCAACCATCAATGCAGCAAGTGTCTCAAAGGCTTTTATCCTCCAATCAGCCATTAGTCATTCCTTTCAATAACATCTCACTCCAGCATTTAGTGAATCAAGATATGCAAATAATCTAG 492 0.376 MNLSYNHLNSYVPSEGYCSSPNFILDGNEELLGLEKMHGSSKELAYTLVVTEKCDVYSFGVLTLETFMGRHPGELILSFSKTCSESILLTDVLDPRLPLPSRKDAQDMTFLVKIALACLNPSPKSQPSMQQVSQRLLSSNQPLVIPFNNISLQHLVNQDMQII 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0886 163 Gene3D Transferase(Phosphotransferase) domain 1 5 145 - -
Alju03g0886 163 Pfam Protein tyrosine and serine/threonine kinase 43 136 IPR001245 GO:0004672|GO:0006468
Alju03g0886 163 SUPERFAMILY Protein kinase-like (PK-like) 43 152 IPR011009 -
Alju03g0886 163 PANTHER LEUCINE RICH REPEAT KINASE 2 35 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0886 Alju-ChrAlju03 35543566 35544888 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0886 51 136 Receptor kinase-like Gene Family AT2G01210 35.106 2.30e-11 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju03g0886 PK_Tyr_Ser-Thr 1.7e-05 CL0016