Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0883 ATGGACATGATTTCGTCTTTCATGGGGGCTTTACTCTTTTGCGCAATCTTAGTGTTTAATTTGGTGCTGAATGTTTCTGGTAATCCCGAAGGTGATGCCCTGAATGCATTTAAGACCAGCGTAGCTGATCCAAACAATGTGCTTCAAAGCTGGGATGCTACCCTTGTCAATCCTTGCACATGGTTTCATGTTACATGCGATGGCGAAAGCGTGACCCGTGTTGATCTTGGAAGTGCCAACCTTTCGGGTCAACTAGTTGCACAGCTTGGTCTACTCCCAAATTTGCAGTACTTGGAACTTTATGGCAATAATATAACTGGAAAAATCCCAGATGAATTTGGAAATTTGACAAATTTGGTGAGCTTGGATCTGTACTCCAATAAAATATCTGGTAGCATACCTGAAGCATTGGGCAAGCTTCAAAAACTACGTTTTCTGCGTCTCAACAATAACTCCTTGAATGGAGCCATTCCCATGACCTTGACTACTGTCTATTCCCTGCAAGTCCTTGATCTTTCAACAAACAAGCTACAAGGAGACATCCCAACCAATGGTTCATTTCAATCGTTTACTCAACTTAGTTTTGACAATAATCGTGATTTGATACCACTAAACATTAAACCTCGACCAATTTCACCTACGCCACCGCCATCTCGTTCAGGCCGTAGTACTACTGGAGCTATTGCTGGAGGAGTTGCTGCTGCTGCTGCTCTAATGTTTGCAGCCCCTGCAATTGCTCTTGCGTATTGCCGGAAGAGGAGACCACAAGATTATTTCTTTGATGTTCCTGCTGAGGAGGACCCTGAAGTTCACCTTGGTCAGCTTAAAAAGTTTCCCCTGCGTGAGCTGCAAGTTGCAACGGACAGCTTTAGTAACAAAAACATTCTGGGAAGAGGTGGATTTGGTAAGGTTTACAAAGGACGGTTAGCTGATGGGTCTCTAGTTGCAGTGAAAAGACTTAAAGAGGAACGCACTCAGGGTGGGGAGCTGCAATTTCAAACAGAAGTAGAAATGATCAGCTTGGCTGTCCACCGTAATTTGCTGCGGCTGCGTGGCTTTTGCATGACACCGACTGAACGGTTACTTGTGTATCCTTACATGGCTAATGGTAGTGTGGCATCATGTTTACGAGACCGCTCGGATTCAAAACCCCCGCTTGAATGGCCTATACGGAAGCGAATCGCGCTGGGAGCTGCAAGGGGGCTTGCTTATTTGCATGATCATTGTAATCCGAAGATCATTCACCGTGATGTTAAAGCTGCCAATATATTATTGGATGAGGAATATGAAGCAGTTGTTGGGGACTTTGGCTTGGCAAAACTCATGGATTACAAAGATACTCATGTTACCACAGCTGTGCGCGGTACAATTGGGCACATTGCACCAGAATACCTCTCCACTGGAAAGTCTTCGGAGAAGACTGATGTTTTTGGTTATGGTGTGATGCTTCTTGAACTAATAACCGGACAGAGGGCTTTCGATCTTGCACGACTTGCCAACGATGATGATGTCATGTTACTTGATTGGGTGAAAGGACTTTTGAAAGACAAGAAATTGGAAACACTGGTGGATGCTGATTTGGCGGGTGAATATAATGAAGAGGAGGTAGAGCAACTAATCCAAGTGGCTTTGCTCTGCACACAAAGCTCGGCTATGGAAAGACCAAAGATGTCTGAGGTGGTGAGGATGCTTGAAGGTGATGGTTTGGCTGAAAAATGGGATCAATGGCAGAAAGACGAGATGCATCGGCGAGATAATCAAACCCTTCTCCCCAATCCTAATTGGCCAATTGCGGATTCAGCTTCACATATCCCCCCAGATGAACTGTCAGGTCCCAGATGA 1842 0.4506 MDMISSFMGALLFCAILVFNLVLNVSGNPEGDALNAFKTSVADPNNVLQSWDATLVNPCTWFHVTCDGESVTRVDLGSANLSGQLVAQLGLLPNLQYLELYGNNITGKIPDEFGNLTNLVSLDLYSNKISGSIPEALGKLQKLRFLRLNNNSLNGAIPMTLTTVYSLQVLDLSTNKLQGDIPTNGSFQSFTQLSFDNNRDLIPLNIKPRPISPTPPPSRSGRSTTGAIAGGVAAAAALMFAAPAIALAYCRKRRPQDYFFDVPAEEDPEVHLGQLKKFPLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISLAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRDRSDSKPPLEWPIRKRIALGAARGLAYLHDHCNPKIIHRDVKAANILLDEEYEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKKLETLVDADLAGEYNEEEVEQLIQVALLCTQSSAMERPKMSEVVRMLEGDGLAEKWDQWQKDEMHRRDNQTLLPNPNWPIADSASHIPPDELSGPR 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0883 613 FunFam Somatic embryogenesis receptor-like kinase 1 367 584 - -
Alju03g0883 613 SUPERFAMILY L domain-like 30 208 - -
Alju03g0883 613 Pfam Leucine rich repeat 93 153 IPR001611 GO:0005515
Alju03g0883 613 MobiDBLite consensus disorder prediction 205 225 - -
Alju03g0883 613 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Alju03g0883 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Alju03g0883 613 ProSiteProfiles Protein kinase domain profile. 290 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g0883 613 SMART serkin_6 290 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g0883 613 Gene3D Transferase(Phosphotransferase) domain 1 367 584 - -
Alju03g0883 613 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 11 574 - -
Alju03g0883 613 FunFam Somatic embryogenesis receptor kinase 1 26 213 - -
Alju03g0883 613 SUPERFAMILY Protein kinase-like (PK-like) 270 565 IPR011009 -
Alju03g0883 613 SMART LRR_typ_2 164 189 IPR003591 -
Alju03g0883 613 SMART LRR_typ_2 92 115 IPR003591 -
Alju03g0883 613 SMART LRR_typ_2 116 140 IPR003591 -
Alju03g0883 613 Gene3D Ribonuclease Inhibitor 27 208 IPR032675 -
Alju03g0883 613 MobiDBLite consensus disorder prediction 580 613 - -
Alju03g0883 613 Pfam Protein kinase domain 291 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g0883 613 Gene3D Phosphorylase Kinase; domain 1 259 366 - -
Alju03g0883 613 FunFam Somatic embryogenesis receptor kinase 1 259 366 - -
Alju03g0883 613 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0883 Alju-ChrAlju03 35423937 35431064 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0883 3 613 Receptor kinase-like Gene Family AT4G33430 72.508 0.0 905
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Alju03g0883 Pkinase 9.5e-45 CL0016